DRSC/TRiP Functional Genomics Resources

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Protein Alignment epsilonTry and Ctrb1

DIOPT Version :10

Sequence 1:NP_525112.1 Gene:epsilonTry / 49080 FlyBaseID:FBgn0010425 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_036668.2 Gene:Ctrb1 / 24291 RGDID:2444 Length:263 Species:Rattus norvegicus


Alignment Length:269 Identity:88/269 - (32%)
Similarity:133/269 - (49%) Gaps:33/269 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LSVLAC-ALAGT-----IPDGLLPQLDG--RIVGGYETSIDAHPYQVSLQ-RYGSHFCGGSIYSH 63
            |.:|:| ||.|.     :|. :.|.|.|  |||.|.:....:.|:||||| :.|.||||||:.|.
  Rat     4 LWLLSCFALVGATFGCGVPT-IQPVLTGLSRIVNGEDAIPGSWPWQVSLQDKTGFHFCGGSLISE 67

  Fly    64 DIVITAAHCLQSIEAKDLKIRVGSTYWRSGGSVHSV------RSFRNHEGYNSRTMVNDIAIIRI 122
            |.|:|||||  .::..|:   |.:..:..|....::      :.|:|.: :|..|:.|||.::::
  Rat    68 DWVVTAAHC--GVKTSDV---VVAGEFDQGSDEENIQVLKIAQVFKNPK-FNMFTVRNDITLLKL 126

  Fly   123 ESDLSFRSSIREI---RIADSNPREGATAVVSGWGTTESGGSTIPDHLLAVDLEIIDVSRCRSDE 184
            .:...|..::..:   .:.|..| .|.....:|||.|:......|:.|....|.|:..:.|:.  
  Rat   127 ATPAQFSETVSAVCLPNVDDDFP-PGTVCATTGWGKTKYNALKTPEKLQQAALPIVSEADCKK-- 188

  Fly   185 FGYGKKIKDTMLCAYAPHKDACQGDSGGPLVSGD----RLVGVVSWGYGCGDVRYPGVYADVAHF 245
             .:|.||.|.|:||.|....:|.||||||||...    .|.|:||||.|......|.||:.|...
  Rat   189 -SWGSKITDVMICAGASGVSSCMGDSGGPLVCQKDGVWTLAGIVSWGSGVCSTSTPAVYSRVTAL 252

  Fly   246 HEWIERTAE 254
            ..|:::..|
  Rat   253 MPWVQQILE 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
epsilonTryNP_525112.1 Tryp_SPc 30..249 CDD:214473 76/232 (33%)
Ctrb1NP_036668.2 Tryp_SPc 34..259 CDD:238113 76/234 (32%)

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