DRSC/TRiP Functional Genomics Resources

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Protein Alignment epsilonTry and St14

DIOPT Version :10

Sequence 1:NP_525112.1 Gene:epsilonTry / 49080 FlyBaseID:FBgn0010425 Length:256 Species:Drosophila melanogaster
Sequence 2:NP_446087.1 Gene:St14 / 114093 RGDID:69288 Length:855 Species:Rattus norvegicus


Alignment Length:248 Identity:79/248 - (31%)
Similarity:114/248 - (45%) Gaps:38/248 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 RIVGGYETSIDAHPYQVSLQRYG-SHFCGGSIYSHDIVITAAHCLQS---IEAKDLKIRVGSTYW 90
            |:|||........|:||||...| .|.||.|:.|.|.:::||||.|.   .:..|      .|.|
  Rat   614 RVVGGTNADEGEWPWQVSLHALGQGHLCGASLISPDWLVSAAHCFQDETIFKYSD------HTMW 672

  Fly    91 -------------RSGGSVHSVRSFRNHEGYNSRTMVNDIAIIRIESDLSFRSSIREIRIADSN- 141
                         .||...|.::....|..:|..|...|||::.:|....:.:.:|.|.:.|:. 
  Rat   673 TAFLGLLDQSKRSASGVQEHKLKRIITHPSFNDFTFDYDIALLELEKPAEYSTVVRPICLPDNTH 737

  Fly   142 --PREGATAVVSGWGTTESGGSTIPDHLLAVDLEIIDVSRCRSDEFGYGKKIKDTMLCA--YAPH 202
              | .|....|:|||.|:.|| |....|...::.:|:.:.|   |....::|...|:|.  .:..
  Rat   738 VFP-AGKAIWVTGWGHTKEGG-TGALILQKGEIRVINQTTC---EELLPQQITPRMMCVGFLSGG 797

  Fly   203 KDACQGDSGGPLVSGDR-----LVGVVSWGYGCGDVRYPGVYADVAHFHEWIE 250
            .|:|||||||||.|.::     ..||||||.||.....||||..:....:||:
  Rat   798 VDSCQGDSGGPLSSVEKDGRIFQAGVVSWGEGCAQRNKPGVYTRIPEVRDWIK 850

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
epsilonTryNP_525112.1 Tryp_SPc 30..249 CDD:214473 77/245 (31%)
St14NP_446087.1 SEA 88..178 CDD:460188
CUB 214..332 CDD:238001
CUB 340..444 CDD:238001
LDLa 454..486 CDD:238060
LDLa 492..523 CDD:238060
LDLa 525..559 CDD:238060
LDLa 567..602 CDD:238060
Tryp_SPc 615..852 CDD:238113 78/247 (32%)
Blue background indicates that the domain is not in the aligned region.

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