DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment epsilonTry and tmprss6

DIOPT Version :10

Sequence 1:NP_525112.1 Gene:epsilonTry / 49080 FlyBaseID:FBgn0010425 Length:256 Species:Drosophila melanogaster
Sequence 2:XP_004913946.2 Gene:tmprss6 / 100489045 XenbaseID:XB-GENE-1011573 Length:806 Species:Xenopus tropicalis


Alignment Length:269 Identity:86/269 - (31%)
Similarity:129/269 - (47%) Gaps:42/269 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 CALAGTIPDGL--------LPQLDGRIVGGYETSIDAHPYQVSLQRYGSHFCGGSIYSHDIVITA 69
            |......|||.        :..:..|:|||.:......|:|.|||..|.|.|||::.:...::||
 Frog   545 CDSIADCPDGSDENNCGCGIQAVGIRLVGGTQAQEGEWPWQASLQVRGEHICGGTLVADQWILTA 609

  Fly    70 AHCL--QSIEAKDLKIRVGSTYWRSGGSVHSVRSFRN-----------HEGYNSRTMVNDIAIIR 121
            |||.  :|..:.:    |.:.|.   |.|...||.:.           |..|:..:...|:|::.
 Frog   610 AHCFTPESYASPE----VWTVYL---GKVRLSRSTQKELAFKVIRLVIHPFYDEDSHDYDVALVL 667

  Fly   122 IESDLSFRS-SIREIRIADSNPR--EGATAVVSGWGTTESGGSTIPDHLLAVDLEIIDVSRCRSD 183
            ::..:...| .::.|.:..|...  .|::..|:|||:.:..|.| .|.|..||::::....| ::
 Frog   668 LDHLVPLTSPHVQPICLPSSTHHFPTGSSCWVTGWGSVKENGPT-SDVLQKVDIQLVAQDIC-TE 730

  Fly   184 EFGYGKKIKDTMLCA-YAP-HKDACQGDSGGPLV----SGDRL-VGVVSWGYGCGDVRYPGVYAD 241
            .:.|  :|...|||| |.. .|||||||||.|||    ||... .|:||||.|||..||.|||:.
 Frog   731 LYRY--QISPRMLCAGYRDGSKDACQGDSGSPLVCKTASGRWFQAGLVSWGAGCGIPRYFGVYSR 793

  Fly   242 VAHFHEWIE 250
            :....:|||
 Frog   794 ITRLVQWIE 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
epsilonTryNP_525112.1 Tryp_SPc 30..249 CDD:214473 79/241 (33%)
tmprss6XP_004913946.2 SEA 77..174 CDD:460188
CUB 235..303 CDD:412131
LDLa 448..478 CDD:238060
LDLa 480..514 CDD:238060
LDLa 525..560 CDD:238060 4/14 (29%)
Tryp_SPc 572..804 CDD:238113 81/242 (33%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.