DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN8 and COP9

DIOPT Version :9

Sequence 1:NP_723378.2 Gene:CSN8 / 49077 FlyBaseID:FBgn0261437 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_193147.1 Gene:COP9 / 827049 AraportID:AT4G14110 Length:197 Species:Arabidopsis thaliana


Alignment Length:198 Identity:48/198 - (24%)
Similarity:90/198 - (45%) Gaps:26/198 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SEVVERLENEEFEQVELGAEVYQQLL----------------AI----YLYQNKLADAKLLWMRV 51
            |.|.|.|..:.|:::   |::...|:                ||    |.|.:....|:.||.|:
plant     4 SPVKEALAAKSFDKI---ADICDTLMLQVASEGIEYHDDWPYAIHLLGYFYVDDCDSARFLWKRI 65

  Fly    52 PANLRDDK-ELIQLNLLNIALQNNNYADFFKHIK-YEWSERVKSPVEDLLNKQREELFKLMGSAY 114
            |..:::.| |::....:...|..::||..::.|: |:||:..|..|....:...:.:|:|:.|||
plant    66 PTAIKERKPEVVAAWGIGQKLWTHDYAGVYEAIRGYDWSQEAKDMVAAFSDLYTKRMFQLLLSAY 130

  Fly   115 MSIYQHNLLELSLMSEDELKHACAALNWTEELDGDRVILKPKVQEAPPARGNDDQLLKLTEFVTF 179
            .:|..|:|.....|:||:.........||.:.......:|.:..:. ..:.:..:|.:|||:|..
plant   131 STITIHDLALFLGMTEDDATTYVVENGWTVDAASQMASVKKQAVKR-EQKVDSSKLQRLTEYVFH 194

  Fly   180 LEN 182
            ||:
plant   195 LEH 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN8NP_723378.2 CSN8_PSD8_EIF3K 22..156 CDD:287089 36/155 (23%)
COP9NP_193147.1 CSN8_PSD8_EIF3K 36..171 CDD:370807 33/134 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 52 1.000 Domainoid score I4293
eggNOG 1 0.900 - - E1_KOG4414
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4882
Inparanoid 1 1.050 59 1.000 Inparanoid score I2558
OMA 1 1.010 - - QHG55757
OrthoDB 1 1.010 - - D1577916at2759
OrthoFinder 1 1.000 - - FOG0005676
OrthoInspector 1 1.000 - - oto3127
orthoMCL 1 0.900 - - OOG6_104449
Panther 1 1.100 - - LDO PTHR13339
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4075
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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