DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN8 and cops8

DIOPT Version :9

Sequence 1:NP_723378.2 Gene:CSN8 / 49077 FlyBaseID:FBgn0261437 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_989106.1 Gene:cops8 / 394711 XenbaseID:XB-GENE-5956805 Length:193 Species:Xenopus tropicalis


Alignment Length:185 Identity:54/185 - (29%)
Similarity:90/185 - (48%) Gaps:18/185 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ERLENEEFEQVELGA-------EVYQQLLAIYLYQNKLADAKLLWMRVPANLRD-DKELIQLNLL 67
            :||: |:.|:.||.|       :||.||||:||..|.:.:|:.||.|:|..::. ..||..:..:
 Frog    14 QRLQ-EQCEEQELEAPGGIANPQVYSQLLALYLLHNDMNNARYLWKRIPPAIKSAHSELGGIWEV 77

  Fly    68 NIALQNNNYADFFKHIK-YEWSERVKSPVEDLLNKQREELFKLMGSAYMSIYQHNLLELSLMSED 131
            ...:...::...:..|. .:|||.::..:|.:.:..|...|.|:..||.||...:......:|.:
 Frog    78 GQKIWQRDFPGIYTSISACQWSEAIQPVMEAVRDATRRRAFGLVSQAYTSISADDFAAFVGLSVE 142

  Fly   132 ELKHACAALNWTEELDGDRVILKPKVQEAP----PARGNDDQLLKLTEFVTFLEN 182
            |.........|..:| ..|:::..|...||    |   |:.||.:||::|.||||
 Frog   143 EAVKGVIEQGWQADL-ATRMVMPKKPDSAPLSLIP---NEQQLARLTDYVAFLEN 193

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN8NP_723378.2 CSN8_PSD8_EIF3K 22..156 CDD:287089 36/142 (25%)
cops8NP_989106.1 CSN8_PSD8_EIF3K 31..166 CDD:370807 33/135 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11378
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4882
Inparanoid 1 1.050 71 1.000 Inparanoid score I5138
OMA 1 1.010 - - QHG55757
OrthoDB 1 1.010 - - D1577916at2759
OrthoFinder 1 1.000 - - FOG0005676
OrthoInspector 1 1.000 - - oto102732
Panther 1 1.100 - - LDO PTHR13339
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4524
SonicParanoid 1 1.000 - - X4075
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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