DRSC/TRiP Functional Genomics Resources

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Protein Alignment CSN8 and cops8

DIOPT Version :9

Sequence 1:NP_723378.2 Gene:CSN8 / 49077 FlyBaseID:FBgn0261437 Length:182 Species:Drosophila melanogaster
Sequence 2:NP_956523.1 Gene:cops8 / 393198 ZFINID:ZDB-GENE-040426-982 Length:191 Species:Danio rerio


Alignment Length:177 Identity:49/177 - (27%)
Similarity:84/177 - (47%) Gaps:13/177 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EFEQVELGA-------EVYQQLLAIYLYQNKLADAKLLWMRVPANLRD-DKELIQLNLLNIALQN 73
            :||..||.|       :||.|||.:||..|.:.:|:.||.|:|..::. :.|:..:..:...:..
Zfish    17 QFETQELEAPGGIATPQVYSQLLVLYLLHNDMNNARYLWKRIPQAIKTANPEMAAIWAVGQRIWQ 81

  Fly    74 NNYADFFKHI-KYEWSERVKSPVEDLLNKQREELFKLMGSAYMSIYQHNLLELSLMSEDELKHAC 137
            .::...:..| .|:|||.:...:|.|....|...:.|:..||.||...:.......|.:|.....
Zfish    82 RDFPGIYSAIAAYQWSESILPVMEALRESTRRRAYGLVAQAYTSISAEDFAAFVGYSVEEAVKGV 146

  Fly   138 AALNWTEELDGDRVILKPKVQEAPPAR--GNDDQLLKLTEFVTFLEN 182
            .:..|  :.|.:..::.|:..:.||..  .|:.||.:||::|.||||
Zfish   147 VSHGW--QADPNTRMIMPQKPDPPPVSLVPNEQQLARLTDYVAFLEN 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CSN8NP_723378.2 CSN8_PSD8_EIF3K 22..156 CDD:287089 34/142 (24%)
cops8NP_956523.1 CSN8_PSD8_EIF3K 32..164 CDD:287089 32/133 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 51 1.000 Domainoid score I11618
eggNOG 1 0.900 - - E1_KOG4414
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4882
Inparanoid 1 1.050 72 1.000 Inparanoid score I5298
OMA 1 1.010 - - QHG55757
OrthoDB 1 1.010 - - D1577916at2759
OrthoFinder 1 1.000 - - FOG0005676
OrthoInspector 1 1.000 - - oto41743
orthoMCL 1 0.900 - - OOG6_104449
Panther 1 1.100 - - LDO PTHR13339
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4524
SonicParanoid 1 1.000 - - X4075
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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