DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mbs and ppp1r16a

DIOPT Version :9

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:XP_001334473.1 Gene:ppp1r16a / 794494 ZFINID:ZDB-GENE-121214-252 Length:553 Species:Danio rerio


Alignment Length:569 Identity:161/569 - (28%)
Similarity:260/569 - (45%) Gaps:101/569 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLDARNNSAMMKRAEQLKRWE--ESDTNRAAPTPRHEHG----RRIKFSSGCVFLAACLSGDKDE 61
            |...|...|..:||:|||.|.  |.|:.|.........|    ||:.|:|..:.|.|....|.:|
Zfish    18 SATERLKQAQKRRAQQLKGWAQMEKDSARGHKADHKGDGVKKSRRVTFNSNVMLLEAAARNDIEE 82

  Fly    62 VVQLLDQGADINTANVDGLTALHQACIDDNLDMVEFLVERGADINRQDNEGWTPLHATASCGFVS 126
            |.|||:.|...:..|.||||||||:||||.|::...|::.||::|..|:|.||||||.|:||...
Zfish    83 VRQLLNNGVSPDLFNEDGLTALHQSCIDDFLEVARCLLDAGANVNACDSELWTPLHAAATCGHTD 147

  Fly   127 IARYLVENGADVAAVNSDGDLALDLAIDVQHMAMIDYMEKMVQELNI---NVDEARKAEELAMLN 188
            :.:.|:|.|||:.|||:||::..||..|   .|.::.:|.::.|..|   .:||.|.|:|..||.
Zfish   148 LVQMLIEAGADLLAVNADGNMPYDLCED---EATLELIEMIMAEQGITQEKIDECRGAKERVMLT 209

  Fly   189 DAKKWLRSDAAEVDRPHPKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAASHWG 253
            |.::.: ::.|::: ...:.|||.||||||.||..|..|||..|.:.|.:|.|||||||||:.||
Zfish   210 DLREMV-TNGADLN-VKDEQGATMLHVAAANGYMSVGELLLEHRLSPDERDADGWTPLHAAACWG 272

  Fly   254 QRETAEMLVESLADMDIRNYAGQSCIDVADRKIVKFLEELRANKRNKRRP-----SSQIRISDAM 313
            |.:..|:||...|.::.::...::.:||...      ||:||.....:..     ..|.:..:.:
Zfish   273 QIQMVELLVAHGASLNAKSELDETPLDVCTD------EEVRAKMMELKHKHDAIMKGQDKHKNTL 331

  Fly   314 ENHVEKTPT--KLVRVEVRTDATKDAENVKPNQQIHAVEHPVEEEAPWRRKLPRTPSDSPTNNQV 376
            :..|..|.:  |:||          ..:|.....::..||..|.:. |:.:..:|.:.....::.
Zfish   332 QRRVSSTGSRGKVVR----------RSSVNERSSLYRREHQKEAKV-WQERGRQTEALDDDEDRQ 385

  Fly   377 PDRELGTNSS--ETANDVIL-----------------RRTQSFENDQKFYQKYNELRA---RIKA 419
            .|.||..::|  .::|.:.:                 ..|.||.         .||::   ..::
Zfish   386 TDAELNLHASLMSSSNAIAVPPLDVGEVENGAQVIGNGSTGSFS---------GELQSGGLMDRS 441

  Fly   420 NSCPILPANANANAAAANKSNNNNNLSSNNYHNNNNNNNKSDLLLGYAAGTTTTTSTPTTTTTTT 484
            .|..:.|.:|:|...:.::..:::.|              :||....||........|....   
Zfish   442 ASYQLSPGSASAGGDSMSRERSHHTL--------------ADLKRQRAAAKLNKHPAPPLPL--- 489

  Fly   485 SSTFNNTHSNTNNTSTTQQQPAAAAAASAANQLYSVQRSASLKDNSMYY 533
                         ::.||.:|.............|||:..:  .|::|:
Zfish   490 -------------SAGTQDEPVPEGPPGTLEPSESVQQVVA--PNAVYF 523

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANK 50..164 CDD:238125 52/113 (46%)
Ank_2 53..142 CDD:289560 43/88 (49%)
ANK repeat 78..109 CDD:293786 17/30 (57%)
ANK 106..290 CDD:238125 74/186 (40%)
ANK repeat 111..142 CDD:293786 16/30 (53%)
ANK repeat 209..239 CDD:293786 17/29 (59%)
Ank_2 213..300 CDD:289560 37/86 (43%)
ANK repeat 241..272 CDD:293786 16/30 (53%)
PRKG1_interact 1177..1272 CDD:292521
ppp1r16aXP_001334473.1 Ank_2 71..163 CDD:289560 44/91 (48%)
ANK repeat 71..97 CDD:293786 9/25 (36%)
ANK 94..281 CDD:238125 86/191 (45%)
ANK repeat 99..130 CDD:293786 17/30 (57%)
ANK repeat 132..163 CDD:293786 16/30 (53%)
ANKYR 133..344 CDD:223738 78/221 (35%)
ANK repeat 227..258 CDD:293786 17/30 (57%)
ANK repeat 260..290 CDD:293786 16/29 (55%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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