DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mbs and ppp1r16a

DIOPT Version :10

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:NP_001072353.1 Gene:ppp1r16a / 779806 XenbaseID:XB-GENE-5762924 Length:549 Species:Xenopus tropicalis


Alignment Length:617 Identity:171/617 - (27%)
Similarity:269/617 - (43%) Gaps:123/617 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RNNSAMMKRAEQLKRW---EESDTNRAAPTPRHEHG----RRIKFSSGCVFLAACLSGDKDEVVQ 64
            |...|..:||:|||:|   |:....:.|...:.:.|    ||:.|......|.|....|.:||..
 Frog    22 RLKHAQKRRAQQLKKWAQFEKDGQGKKAKGRQKKQGSKEERRVMFPQNVTLLEAAARNDIEEVRH 86

  Fly    65 LLDQGADINTANVDGLTALHQACIDDNLDMVEFLVERGADINRQDNEGWTPLHATASCGFVSIAR 129
            ||..|...|..|.||||||||.||||..::|..|:..|||:|..|:|.||||||.|:||.:.:..
 Frog    87 LLQNGFSPNLYNEDGLTALHQCCIDDYEEIVRMLIGAGADVNACDSELWTPLHAAATCGHLHLVE 151

  Fly   130 YLVENGADVAAVNSDGDLALDLAIDVQHMAMIDYMEKMVQELNI---NVDEARKAEELAMLNDAK 191
            .|:::||::.||||||::..||..|   ...:|::|..:.|..|   .::|.|.|.|..||.|.:
 Frog   152 LLIKHGANLLAVNSDGNMPYDLCED---DVTLDHIETAMAEQGITQEKIEECRGATEQHMLEDIQ 213

  Fly   192 KWLRSDAAEVDRPHPKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAASHWGQRE 256
            . |.....||:..:|. |.:.||:|||.||.....|||..:..|:.:|.|||.|||||:.|||..
 Frog   214 H-LVETGGEVNAHNPH-GTSLLHIAAANGYLATAELLLEHKAQVNARDQDGWEPLHAAACWGQIH 276

  Fly   257 TAEMLVESLADMDIRNYAGQSCIDV-ADRKI-VKFLE-----ELRANKRNKRRPSSQIRISDAME 314
            ..|:||...||::.::...::.:|| .|.:: .|.||     |.....::|.|.:.|.|.|.|  
 Frog   277 VVELLVAHGADLNSKSQLDETPLDVCGDEEVRAKILELKHKHEAIRKSQDKHRTALQRRTSSA-- 339

  Fly   315 NHVEKTPTKLVRVEVRTDATKDAENVKPNQQIHAVEHPVEEEAPWRRKLPRTPSDSPTNNQVPDR 379
                .:..|:||....|:.|          .::..||. :|...|:::..|       .|:|..:
 Frog   340 ----GSRGKVVRRVSVTERT----------NMYRREHQ-KEAMVWQQRGSR-------ENEVEQQ 382

  Fly   380 ELGTNSSETANDVILRRTQSFENDQKFYQKYNELRARIKANSCPI----LPANANANAAAANKSN 440
            :  .:..:|.|..:.:...|.|.:.       |..||.:.:..|.    :|.:::..:     .:
 Frog   383 D--EDEDKTTNTEMQQHQPSAEAEP-------EKAARNEGDEGPAEGSDVPVSSSLQS-----FH 433

  Fly   441 NNNNLSSNNYHNNNNNNNKSDLLLGYAAGTTTTTSTPTTTTTTTSSTFNNTHSNTNNTSTTQQQP 505
            .|.:|...:.|..:...::|             .|....|...|....:|..|:.......:|:.
 Frog   434 RNGSLVPASKHTFSKRLDRS-------------VSYQLATQGDTGPDLSNERSHHTLAELKRQRA 485

  Fly   506 AAAAAASAANQLYSVQRSA----SLKDNSMYYRKPTVTIATSTAATAINSP---STTVQTPPIRS 563
            ||           .:||.|    .|.|:.          |..::.:|...|   :|....||:  
 Frog   486 AA-----------KLQRHAPPPPPLSDSE----------AQDSSGSAPEEPVYYTTASGEPPL-- 527

  Fly   564 QVTAKIAEKSNNGSSSTASVSDAESSKPPPKQ 595
               .|:             ::.||.:.|..|:
 Frog   528 ---LKL-------------IAPAEETTPAEKR 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANKYR 50..300 CDD:440430 102/259 (39%)
ANK repeat 78..109 CDD:293786 18/30 (60%)
ANK repeat 111..142 CDD:293786 14/30 (47%)
ANK repeat 209..239 CDD:293786 12/29 (41%)
ANK repeat 241..272 CDD:293786 16/30 (53%)
IPD_PPP1R12 606..648 CDD:412018
PRKG1_interact 1177..1273 CDD:464927
ppp1r16aNP_001072353.1 ANKYR 72..332 CDD:440430 104/264 (39%)
ANK repeat 72..98 CDD:293786 9/25 (36%)
ANK repeat 100..131 CDD:293786 18/30 (60%)
ANK repeat 133..164 CDD:293786 14/30 (47%)
ANK repeat 228..259 CDD:293786 12/31 (39%)
ANK repeat 261..289 CDD:293786 16/27 (59%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.