DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mbs and Ppp1r16b

DIOPT Version :9

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:NP_001178001.1 Gene:Ppp1r16b / 680616 RGDID:1589460 Length:568 Species:Rattus norvegicus


Alignment Length:549 Identity:156/549 - (28%)
Similarity:239/549 - (43%) Gaps:104/549 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 RNNSAMMKRAEQLKRWEESDTNRAAPTPRHEH-----GRR--IKFSSGCVFLAACLSGDKDEVVQ 64
            |..:|..:||:|||:|.:.:.:......:||.     |||  :.|.:....|.|.|..|.:||..
  Rat    22 RLRAAQKRRAQQLKKWAQYEQDLLHRKRKHERKRSTGGRRKKVSFEASVALLEASLRNDAEEVRY 86

  Fly    65 LLDQGADINTANVDGLTALHQACIDDNLDMVEFLVERGADINRQDNEGWTPLHATASCGFVSIAR 129
            .|......:..|.||||||||.|||:..::|:.|:..||::|.:|||.||||||.|:||.:::.:
  Rat    87 FLKNKVSPDLCNEDGLTALHQCCIDNFEEIVKLLLSHGANVNAKDNELWTPLHAAATCGHINLVK 151

  Fly   130 YLVENGADVAAVNSDGDLALDLAIDVQHMAMID---YMEKMVQELNINVDEARKAEELAMLNDAK 191
            .||:.|||:.||||||::..||..|...:.:|:   ..:.:.||   .::|.|.|.|..|::|..
  Rat   152 ILVQYGADLLAVNSDGNMPYDLCEDEPTLDVIETCMAYQGITQE---KINEMRAAPEQKMISDIH 213

  Fly   192 KWLRS--DAAEVDRPHPKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAASHWGQ 254
            ..:.:  |...:|    ..|||.||:|.|.||.:...|||.....||.:|.|||.|||||:.|||
  Rat   214 CMIAAGQDLDWID----GQGATLLHIAGANGYLRAAELLLDHGVRVDVKDWDGWEPLHAAAFWGQ 274

  Fly   255 RETAEMLVESLADMDIRNYAGQSCIDVADRKIVKFL-------------EELRANKRNKRRPSS- 305
            ...||:||...|.:..|....:..||:.:.:..|.|             .:||......||.|| 
  Rat   275 MPMAELLVSHGASLSARTSMDEMPIDLCEEEEFKVLLLELKHKHDVIMKSQLRHKSSLSRRTSSA 339

  Fly   306 --------QIRISD----------------AMENHVEKTPTKLVRVEVRTDATKDAENVKPNQQI 346
                    :..:||                ...:..|:..|.....::|...| |.||..||.::
  Rat   340 GSRGKVVRRASLSDRTNLYRKEYEGEAILWQQRSAAEEQRTSTYNGDIRETRT-DQENKDPNPRL 403

  Fly   347 HAVEHPVEEEAPWRRKLPRTPSDSPTNN----------------------QVPDRELGTNSSETA 389
               |.|| ..:.:..|:.|...|.|..|                      ::||..:...:...|
  Rat   404 ---EKPV-LLSEFSTKISRGELDGPVENGLRAPVSTYQYALANGDIWKMHEIPDYSMAYGNPGMA 464

  Fly   390 NDVILRRTQSFENDQKFYQKYNELRARIKANSCPILPANANANAAAANKSNNNNNLSSNNYHNNN 454
             ||....:...|...:...:....||..|..|.|.|..:..::.|.:.:               .
  Rat   465 -DVPPPWSGFKEQSPQTLLELKRQRAAAKLLSHPFLSTHLGSSVARSGE---------------G 513

  Fly   455 NNNNKSDLLLG----YAAGTTTTTSTPTT 479
            ::..|:.|:.|    |::..|:...|.|:
  Rat   514 SSEGKAPLIGGRTSPYSSNGTSVYYTVTS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANK 50..164 CDD:238125 51/116 (44%)
Ank_2 53..142 CDD:289560 41/88 (47%)
ANK repeat 78..109 CDD:293786 16/30 (53%)
ANK 106..290 CDD:238125 73/188 (39%)
ANK repeat 111..142 CDD:293786 16/30 (53%)
ANK repeat 209..239 CDD:293786 14/29 (48%)
Ank_2 213..300 CDD:289560 35/99 (35%)
ANK repeat 241..272 CDD:293786 16/30 (53%)
PRKG1_interact 1177..1272 CDD:292521
Ppp1r16bNP_001178001.1 PHA03095 71..>301 CDD:222980 94/236 (40%)
ANK repeat 71..98 CDD:293786 7/26 (27%)
Ank_2 72..164 CDD:403870 42/91 (46%)
ANK repeat 100..131 CDD:293786 16/30 (53%)
ANK repeat 133..164 CDD:293786 16/30 (53%)
ANK repeat 166..259 CDD:293786 30/99 (30%)
ANK repeat 261..292 CDD:293786 16/30 (53%)
ANK repeat 294..318 CDD:293786 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0505
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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