DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mbs and ppp1r27b

DIOPT Version :9

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:NP_001032181.1 Gene:ppp1r27b / 559662 ZFINID:ZDB-GENE-051023-5 Length:156 Species:Danio rerio


Alignment Length:119 Identity:43/119 - (36%)
Similarity:61/119 - (51%) Gaps:13/119 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RRIKFSSGCVFLAACLSGDKDEVVQLLDQGADINTANV-------DGLTALHQACIDDNLDMVEF 97
            |.:.|.:..||......|:.:.|      |..|.|..|       .|:.|:|:|.:..|::.|:.
Zfish    27 RIVHFPNDIVFQDCVRQGELERV------GCFIQTRRVSLDTIYHSGMAAIHEAVLSGNMECVKL 85

  Fly    98 LVERGADINRQDNEGWTPLHATASCGFVSIARYLVENGADVAAVNSDGDLALDL 151
            ||:.||||.::|.:||||||...|.||..||:|.:..|||..|.|..|:...||
Zfish    86 LVKSGADITQRDEDGWTPLHMACSDGFPEIAKYSISLGADTEAKNDCGEKPADL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANK 50..164 CDD:238125 40/109 (37%)
Ank_2 53..142 CDD:289560 35/95 (37%)
ANK repeat 78..109 CDD:293786 12/30 (40%)
ANK 106..290 CDD:238125 21/46 (46%)
ANK repeat 111..142 CDD:293786 16/30 (53%)
ANK repeat 209..239 CDD:293786
Ank_2 213..300 CDD:289560
ANK repeat 241..272 CDD:293786
PRKG1_interact 1177..1272 CDD:292521
ppp1r27bNP_001032181.1 ANK 40..148 CDD:238125 39/106 (37%)
Ank_2 40..130 CDD:289560 35/95 (37%)
ANK repeat 66..97 CDD:293786 12/30 (40%)
ANK repeat 99..130 CDD:293786 16/30 (53%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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