DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Mbs and Myo16

DIOPT Version :9

Sequence 1:NP_001246786.1 Gene:Mbs / 49070 FlyBaseID:FBgn0005536 Length:1273 Species:Drosophila melanogaster
Sequence 2:XP_008769606.1 Gene:Myo16 / 192253 RGDID:621561 Length:1934 Species:Rattus norvegicus


Alignment Length:1085 Identity:225/1085 - (20%)
Similarity:385/1085 - (35%) Gaps:289/1085 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LDARNNSAMMKRAEQLKRWEESD---------TNRAAPTPRHEHGRRIKFSSGCVFLAACLSGDK 59
            |..|.......|.||:|.:.|.:         ..|..|    ...::::|....:...|.:....
  Rat    35 LGQRQRLVRRMRCEQIKAYYEREKVFQKQEGLLKRIKP----GKSQKVRFGLADMIQDAIIHHHD 95

  Fly    60 DEVVQLLDQGADINTANVDGLTALHQACIDDNLDMVEFLVERGADINRQDNEGWTPLHATASCGF 124
            .||:|||.:|||.:|....|.:.||.....||:.:.|.|::||.::|.||.:.|.|:|...:|..
  Rat    96 KEVLQLLKEGADPHTLVSSGGSLLHLCARYDNVFIAEVLIDRGVNVNHQDEDFWAPMHIACACDN 160

  Fly   125 VSIARYLVENGADVAAVNSDGDLALDLAIDVQHMA--MIDYMEKMVQELNINVDEARKAEELAML 187
            ..|...|:..||:|...:.:|::.||.|::....:  ::.|:::...:|| ::.:.:....|:||
  Rat   161 PDIVLLLILAGANVLLQDVNGNIPLDYAVEGTESSAILLAYLDENGVDLN-SLRQIKLQRPLSML 224

  Fly   188 NDAKKWLRSDAAEVDRPHPKTGATALHVAAAKGYTKVLGLLLAGRGNVDRQDNDGWTPLHAASHW 252
            .|.:.:| |...:|:..: ..|.|.||:|.|.||.:|:.|||...|:::..|:..|||||.|:.:
  Rat   225 TDVRHFL-SSGGDVNEKN-DDGVTLLHMACASGYKEVVLLLLEHGGDLNGMDDGYWTPLHLAAKY 287

  Fly   253 GQRETAEMLVESLADMDIRNYAGQSCIDVADRKIVKFL---EELRANKRNKRRPS----SQIRIS 310
            ||....::|:...|:..:.|..|:...|:|..:.::.:   .|:...:|.|..||    :|..:.
  Rat   288 GQTTLVKLLLAHQANPHLVNCNGEKPSDIAASESIEEMLLKAEIAWEERMKESPSVPSLAQEELY 352

  Fly   311 DAMENHVEKTPTK---LVRVEVRTDAT-------KDAENVKPNQQIHAVEHPVEEEAPWRRKLPR 365
            :.:.:.:.:..:|   ||....:.|:.       ||......||:        .::.|     |.
  Rat   353 EEILHDLPELSSKLSPLVLPIAKQDSLLEKDIMFKDTTKGLCNQE--------SQDGP-----PE 404

  Fly   366 T----PSDSPTNNQV----PDRELGTNSSETANDVILRRTQSFENDQ---------------KFY 407
            |    .|..|...|:    |..:|.|.|....:.::....:.|.|||               |..
  Rat   405 TSMVSSSSKPEQVQLTPPAPSDDLATLSELNDSSLLYEIQKRFGNDQIHTFIGDIFLLVNPFKEL 469

  Fly   408 QKYNELRARI----KANSCPILPANANANAAAANKSNNNNNLSSNNYHNNNNNNNKSDLLLGYAA 468
            ..|:.:.:::    .....|.||.:..:.|..|             :|.........:::|....
  Rat   470 PIYSTVVSQMYLSPTGQRSPSLPPHLFSCAERA-------------FHRLFQERRPQNIILSGER 521

  Fly   469 GTTTT----------TSTPTTTTTTTSSTFNNT--------HSNT--NNTSTTQQQPAAAAAASA 513
            |:..|          ||..:::.|...|.|.:.        |:.|  ||.|            |.
  Rat   522 GSGKTQASKQIMKHLTSRASSSCTMFDSRFKHAICILEAFGHAKTTLNNVS------------SC 574

  Fly   514 ANQLYSVQRSASLKDNSMYYRKPTVTIATSTAATAINSPSTTVQTPP-----IRSQVTAKIAEKS 573
            ..|.:.:|         ...|:..|| ....:...:..|....|.|.     |.|.:...::.:.
  Rat   575 LIQYWELQ---------FCQRRKHVT-GARISTYMLEKPRLVAQPPGQGSFLIFSWLMDGLSAEE 629

  Fly   574 NNG-------------SSSTASVSDAESSKPPPK----QSASNMI-------KNFFK--SFVPPV 612
            ..|             ......||.||.|....:    :.|.|:|       :|.|.  |.:..:
  Rat   630 KCGLHLSNFCAHRYVSQGMREDVSTAERSLNKERLADLKHALNVIGFSALEVENLFAILSAILHI 694

  Fly   613 RDEESETQRKAHAKRVRETRRSTQ-----GVTLDEIKSA-------------------------E 647
            .|.:.....:|.:..|.:.:...|     .|:.||:.||                         .
  Rat   695 GDIQFTALTEADSAFVSDLQLLEQVADMLQVSTDELASALTTDIQYFKGDVIIRRHTTQIAAFYR 759

  Fly   648 ELVKK----KNMGMANNNNNNNISTTTTNTISNSGNETSSASSTSAPTPSILGSNE-QQDELQPP 707
            :|:.|    :..|...|         |.|....|.:|..|..:.......|.|..| |::|.:  
  Rat   760 DLLAKSLYSRLFGFLIN---------TVNCCLQSQDEYKSLQTLDIGILDIFGFEEFQKNEFE-- 813

  Fly   708 PPPTTPPPAVIPTTTTATDETEIEEVVSSPPAGQSQNDTTASFTLSAPVRRSLSTEGEAD-ANSD 771
                    .:....|.......|:||:......:...:..|..|..:|..::    |..| ....
  Rat   814 --------QLCVNLTNEKMHHYIQEVLFLQEQTECVQEGVAMETACSPGNQA----GVLDFFFQK 866

  Fly   772 PEG-----DQDQTVVSASYTIMPRR-ERLPESSENVESIRSPQKTEPVAKSSSEDKSEEPPHARP 830
            |.|     |::...:.:....:||: :.|.||| |..::.||.|.                    
  Rat   867 PSGFFSLLDEESQAIWSVEPNLPRKLQGLLESS-NTNAVYSPMKD-------------------- 910

  Fly   831 TDLPLIPAPAAPSTEAIKSSSAATT------------PAALESPVRLRDKRGLSGS-----QESE 878
                      .....|.|...||.|            ..|:|     |:|..||.:     :.||
  Rat   911 ----------GNGNVAFKGQGAAFTVMHYAGRVTYEIRGAVE-----RNKDSLSQNLLFVMKTSE 960

  Fly   879 T----------KSDTASPVSSHPDFNARDSLLSLYARRTTDSSAG 913
            .          .|.|.|.:||:|.|.......||.::|...|..|
  Rat   961 NVVISHLFQSKLSPTGSLISSYPSFKFGGHKSSLLSKRIASSMVG 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MbsNP_001246786.1 ANK 50..164 CDD:238125 35/115 (30%)
Ank_2 53..142 CDD:289560 31/88 (35%)
ANK repeat 78..109 CDD:293786 10/30 (33%)
ANK 106..290 CDD:238125 54/185 (29%)
ANK repeat 111..142 CDD:293786 9/30 (30%)
ANK repeat 209..239 CDD:293786 13/29 (45%)
Ank_2 213..300 CDD:289560 28/89 (31%)
ANK repeat 241..272 CDD:293786 10/30 (33%)
PRKG1_interact 1177..1272 CDD:292521
Myo16XP_008769606.1 ANKYR 86..332 CDD:223738 74/248 (30%)
ANK 89..190 CDD:238125 35/100 (35%)
ANK repeat 114..145 CDD:293786 10/30 (33%)
ANK 142..297 CDD:238125 48/157 (31%)
ANK repeat 147..178 CDD:293786 9/30 (30%)
ANK repeat 180..210 CDD:293786 5/29 (17%)
ANK repeat 243..274 CDD:293786 13/30 (43%)
ANK repeat 276..307 CDD:293786 10/30 (33%)
MYSc 425..1161 CDD:214580 121/675 (18%)
MYSc_Myo16 437..1154 CDD:276844 118/663 (18%)
NYAP_N 1246..1603 CDD:292079
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0505
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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