DRSC/TRiP Functional Genomics Resources

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Protein Alignment NSF and Fign

DIOPT Version :10

Sequence 1:NP_006169.2 Gene:NSF / 4905 HGNCID:8016 Length:744 Species:Homo sapiens
Sequence 2:NP_608763.2 Gene:Fign / 33544 FlyBaseID:FBgn0031519 Length:523 Species:Drosophila melanogaster


Alignment Length:414 Identity:113/414 - (27%)
Similarity:181/414 - (43%) Gaps:82/414 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   108 DSNPYDTDKMAAEFIQQFNNQAFSVGQQLVFSFNEKLFGLLVKDIEAMDPSILKGEPATGKRQKI 172
            :|....|.|:.|   ||:::::.|   |..|.|......|::.:::.      |...||.:...:
  Fly   129 ESRNNSTKKIDA---QQYSSESSS---QSGFGFRTAREQLIMDELKK------KNRQATSEVDAV 181

Human   173 EVGLVVGNSQVAFEKAENSSLNLIGKAKTKEN----RQSIINP---------------------- 211
            ..|::....:....|...|| |.:......:|    |.|.|.|                      
  Fly   182 PTGMMNFRKKTLGGKRTVSS-NFVSPVAQNDNSTSSRSSSIPPALAHLDSKMVDHILGESMHDFK 245

Human   212 --DWNFEKMGIGGLDKEFSDIFRRAFASRVFPPEIVEQMGCKHVKGILLYGPPGCGKTLLARQIG 274
              .|.    .|.||:...| .|..|....:..|::...:.|. .:|:||:||||.||||:|:.|.
  Fly   246 PVAWE----DIAGLESAKS-TFLEAIIMPLRRPDLFTGVRCP-PRGVLLFGPPGTGKTLIAKSIA 304

Human   275 KMLNAREPKVVNGPEILNKYVGESEANIRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGS 339
            ....|:... :|...:.:|:||::|..::.|||.|...|..        ||..||:|::..:|.:
  Fly   305 SQAKAKFFS-INPSSLTSKWVGDAEKLVKTLFAVAAAHQPA--------IIFIDEVDSLLSKRSA 360

Human   340 MAGSTGVHDTVVNQLLSKIDGV---EQLNNILVIGMTNRPDLIDEALLRPGRLEVKMEIGLPDEK 401
            ....:.:.  :.|:.|..:||.   |:: .:||||.||||..:|||:.|  |...::.:.||..:
  Fly   361 NENESTLR--LKNEFLIHLDGAASNEEI-RVLVIGATNRPQELDEAVRR--RFVRRLYVPLPTRE 420

Human   402 GRLQILH--IHTARMRGHQLLSADV-DIKELAVETKNFSGAELEGLVRAAQSTAMNRHIKASTKV 463
            .|.:|:.  ||..:   |.|   || .:.|||..|..:|||:::.|.|.| |.|..|.:...   
  Fly   421 ARQKIIEKLIHQVK---HNL---DVRQVIELAELTDGYSGADVDTLCRYA-SMAPLRSLTPD--- 475

Human   464 EVDMEKAESLQ---VTRGDFLASL 484
              .||..|:.|   ||..||..:|
  Fly   476 --QMEVIETHQLPAVTMDDFKQAL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NSFNP_006169.2 CDC48_N 6..83 CDD:215012
CDC48_2 111..183 CDD:215011 14/71 (20%)
CDC48 159..>606 CDD:273521 102/363 (28%)
RecA-like_NSF-SEC18_r1-like 219..395 CDD:410912 56/178 (31%)
FignNP_608763.2 PH-like <4..50 CDD:473070
P-loop containing Nucleoside Triphosphate Hydrolases 229..414 CDD:476819 57/204 (28%)
AAA_lid_3 444..495 CDD:465537 21/56 (38%)
Vps4_C <480..520 CDD:462762 7/18 (39%)
Blue background indicates that the domain is not in the aligned region.

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