DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk2 and cnih2

DIOPT Version :9

Sequence 1:NP_001263143.1 Gene:Gprk2 / 49045 FlyBaseID:FBgn0261988 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_001072219.1 Gene:cnih2 / 779666 XenbaseID:XB-GENE-952875 Length:162 Species:Xenopus tropicalis


Alignment Length:47 Identity:14/47 - (29%)
Similarity:22/47 - (46%) Gaps:5/47 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   617 VNIDESDTNFYTKFNTGSVSISWQN-EMMETEC--FRELNVFGPEEC 660
            :..||..|:|......|:.|.:.:. :.:|..|  .|:|.|  ||.|
 Frog    29 IAFDELRTDFKNPIEQGNPSRARERVKNVERICCLLRKLVV--PEYC 73

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk2NP_001263143.1 RGS 35..>111 CDD:295367
RGS <248..305 CDD:295367
STKc_GRK4_like 308..597 CDD:270756
S_TKc 309..574 CDD:214567
cnih2NP_001072219.1 Cornichon 8..151 CDD:367442 14/47 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165172886
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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