DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk2 and prkcaa

DIOPT Version :9

Sequence 1:NP_001263143.1 Gene:Gprk2 / 49045 FlyBaseID:FBgn0261988 Length:714 Species:Drosophila melanogaster
Sequence 2:XP_021332537.1 Gene:prkcaa / 497384 ZFINID:ZDB-GENE-050208-100 Length:679 Species:Danio rerio


Alignment Length:346 Identity:126/346 - (36%)
Similarity:194/346 - (56%) Gaps:27/346 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 FRMYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMVLIEKQIL-QKINSPFVVNL 372
            |....|||||.||:|...:::::.:::|.|.|:|..:.:.......::||::| |:...||:..|
Zfish   346 FNFLAVLGKGSFGKVMLAEMKSSDELFAIKILKKDVVIQDDDVECTMVEKRVLAQQDKPPFLTQL 410

  Fly   373 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFELERARFYAAEVACGLQHLHKQGIVYRDCK 437
            ...::|.|.|..|:..:|||||.:||..:|   .|:..:|.|||||:|.||..|||:||:|||.|
Zfish   411 HSCFQTVDRLYFVMEYVNGGDLMYHIQQVG---KFKEPQAVFYAAEIAVGLFFLHKKGIIYRDLK 472

  Fly   438 PENILLDDHGHVRISDLGLAVE-IPEGEMVRGRVGTVGYMAPEVIDNEKYAFSPDWFSFGCLLYE 501
            .:|::||..||::|:|.|:..| |.||...|...||..|:|||:|..:.|..|.||:::|.||||
Zfish   473 LDNVMLDAEGHIKIADFGMCKENIVEGVTTRTFCGTPDYIAPEIIAYQPYGRSVDWWAYGVLLYE 537

  Fly   502 MIEGQAPFRMRKEKVKREEVDRRVKEDPEKYSSKFNDEAKSMCQQLLAKSIKQRLGCRNGRMGGQ 566
            |:.||.||....|    :|:.:.:.|....||...:.||.|:|:.|:.|...:||||  |:.|.:
Zfish   538 MLAGQPPFDGEDE----DELFQSIMEHNVSYSKTLSKEAVSICKGLMTKHPSKRLGC--GQEGER 596

  Fly   567 DVMAHPFFHSTQLNWRRLEAGMLEPPFVPDPHAVYAKDVLDIEQFST-----------VKGVNID 620
            |:..|.||.  :::|.||....::|||.|   .|..|...:.::|.|           :...|||
Zfish   597 DIREHAFFR--RIDWDRLANREVQPPFKP---KVCGKGAENFDKFFTRTQPQLTPPDELVIANID 656

  Fly   621 ESDTNFYTKFNTGSVSISWQN 641
            ::|.:.:|..|...|..|..|
Zfish   657 QADFDGFTFVNPQFVHPSLVN 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk2NP_001263143.1 RGS 35..>111 CDD:295367
RGS <248..305 CDD:295367
STKc_GRK4_like 308..597 CDD:270756 113/289 (39%)
S_TKc 309..574 CDD:214567 104/266 (39%)
prkcaaXP_021332537.1 C1_1 35..87 CDD:278556
C1_1 100..150 CDD:278556
C2_PKC_alpha_gamma 157..287 CDD:175992
STKc_cPKC_alpha 335..675 CDD:270766 124/342 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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