DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk2 and Pkcdelta

DIOPT Version :9

Sequence 1:NP_001263143.1 Gene:Gprk2 / 49045 FlyBaseID:FBgn0261988 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0259680 Length:1894 Species:Drosophila melanogaster


Alignment Length:646 Identity:174/646 - (26%)
Similarity:256/646 - (39%) Gaps:165/646 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   106 IGRRFLDVEAQLELRNGSGGDALDAETQEELLLNSSNANPTETAETEHCNNTTANNCNNINN-SN 169
            ||...::|.|...:.:.:...|.||.......|:|:|:          |.....||.:.... ||
  Fly  1240 IGVAAVNVAAVAVVASAAAAAATDAAADATTSLSSNNS----------CGEGVGNNLSKFATVSN 1294

  Fly   170 NSQHSSDINHKKLD---------TRNHNGDDATGNGSSHQD----DG------------------ 203
            .:|...|:: .:||         ::..:.||..|:|||..|    ||                  
  Fly  1295 LAQCLRDVD-AELDDYIPSSAENSQEDDDDDDDGSGSSSDDYSSVDGCANLSASMKKKLRKEKKK 1358

  Fly   204 ----------------------DESVKC---------------------------QEGHDD---A 216
                                  |.:.||                           .|..||   :
  Fly  1359 QKAKAAAAAEAKRFDPHKKIKIDTTNKCYVKEEAPRYPLVATPRPLWKREKIVYSDENTDDESGS 1423

  Fly   217 EKGGGG-------EGGGGGKCVPVGGYPDELVLDVL------NDDLIAQVRNKLNSGGKDI---- 264
            |:|.||       :..||.:|...........||.:      .......|.:..||.|.:.    
  Fly  1424 EEGSGGSLDEDSDDESGGEECSSTSSSASSEDLDAVAMVTKAGSSNATTVLDSSNSSGSNAGTLS 1488

  Fly   265 ----------------------FAQCVNAVKAFLAG----EPFREFESSMYFHRYLQWKWLEAQP 303
                                  .:.|.|. ..|..|    .|.:..|:|..:.::.:.....|..
  Fly  1489 VPSAGSGSGGGASTSSSPSIIRMSTCSND-SGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPA 1552

  Fly   304 ITYKTFRMY--------RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMVLIEKQI 360
            .....|:.|        .|||||.||:|...::|.|...||.|.|:|..:.:.......|||:::
  Fly  1553 TVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKV 1617

  Fly   361 LQ-KINSPFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFELERARFYAAEVACGLQ 424
            |. ....|::.:|...::|:..|..|:..:|||||.|||...|   .|..||||||.||:..||:
  Fly  1618 LALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESG---RFSEERARFYGAEIISGLK 1679

  Fly   425 HLHKQGIVYRDCKPENILLDDHGHVRISDLGLA-VEIPEGEMVRGRVGTVGYMAPEVIDNEKYAF 488
            .|||:||:|||.|.:|:|||..|||||:|.|:. ::|...:......||..|||||:|..|||..
  Fly  1680 FLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQ 1744

  Fly   489 SPDWFSFGCLLYEMIEGQAPFRMRKEKVKREEVDRRVKEDPEKYSSKFNDEAKSMCQQLLAKSIK 553
            :.||:|||.|||||:.||:||....|    :|:...:..:...:....:.||..:.:.||.|...
  Fly  1745 NVDWWSFGVLLYEMLIGQSPFSGCDE----DELFWSICNEIPWFPVYISAEATGILKGLLEKDYT 1805

  Fly   554 QRLGCRNGRMGGQDVMAHPFFHSTQLNWRRLEAGMLEPPFVPDPHAVYAKDVLDIEQFSTV 614
            :|:|.:....|  |:..|.||.  .::|..||...:||||.|.     .|..||.:.|..|
  Fly  1806 KRIGSQYSPAG--DIADHIFFR--PIDWGLLEKRQIEPPFKPQ-----VKHPLDTQYFDRV 1857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk2NP_001263143.1 RGS 35..>111 CDD:295367 2/4 (50%)
RGS <248..305 CDD:295367 12/86 (14%)
STKc_GRK4_like 308..597 CDD:270756 114/298 (38%)
S_TKc 309..574 CDD:214567 104/274 (38%)
PkcdeltaNP_572797.3 S_TKc 1566..1824 CDD:214567 102/266 (38%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 117/304 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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