DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gprk2 and Prkch

DIOPT Version :9

Sequence 1:NP_001263143.1 Gene:Gprk2 / 49045 FlyBaseID:FBgn0261988 Length:714 Species:Drosophila melanogaster
Sequence 2:NP_032882.2 Gene:Prkch / 18755 MGIID:97600 Length:683 Species:Mus musculus


Alignment Length:364 Identity:120/364 - (32%)
Similarity:180/364 - (49%) Gaps:52/364 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 FRMYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMVLIEKQILQKI-NSPFVVNL 372
            |...||||||.||:|...:::.||::||.|.|:|..|.:.......:.||:||... |.||:..|
Mouse   355 FEFIRVLGKGSFGKVMLARIKETGELYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 419

  Fly   373 AYAYETKDALCLVLTIMNGGDLKFHIYNMGGEPGFELERARFYAAEVACGLQHLHKQGIVYRDCK 437
            ...::|.|.|..|:..:|||||.|||..   ...|:..||||||||:...|..||::||:|||.|
Mouse   420 FCCFQTPDRLFFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHEKGIIYRDLK 481

  Fly   438 PENILLDDHGHVRISDLGLAVE-IPEGEMVRGRVGTVGYMAPEVIDNEKYAFSPDWFSFGCLLYE 501
            .:|:|||..||.:::|.|:..| |..|.......||..|:|||::....|..:.||::.|.||||
Mouse   482 LDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYE 546

  Fly   502 MIEGQAPFRMRKEKVKREEVDRRVKEDPEKYSSKFNDEAKSMCQQLLAKSIKQRLGCRNGRMGGQ 566
            |:.|.|||....|    :::...:..|...|.:..:::|..:.:..:.|:...|||...  .||:
Mouse   547 MLCGHAPFEAENE----DDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLT--QGGE 605

  Fly   567 -DVMAHPFFHSTQLNWRRLEAGMLEPPFVP-----------DPHAVYAKDVLDIEQFSTVKGVNI 619
             :::.||||  .:::|.:|....|||||.|           ||..:..:.||             
Mouse   606 HEILRHPFF--KEIDWAQLNHRQLEPPFRPRIKSREDVSNFDPDFIKEEPVL------------- 655

  Fly   620 DESDTNFYTKFNTGSVSISWQNEMMETECFRELNVFGPE 658
                    |..:.|.:.:..|:|      ||..:...||
Mouse   656 --------TPIDEGHLPMINQDE------FRNFSYVSPE 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gprk2NP_001263143.1 RGS 35..>111 CDD:295367
RGS <248..305 CDD:295367
STKc_GRK4_like 308..597 CDD:270756 108/301 (36%)
S_TKc 309..574 CDD:214567 98/267 (37%)
PrkchNP_032882.2 C2_PKC_epsilon 8..140 CDD:175981
C1_1 172..222 CDD:365894
C1_1 246..296 CDD:365894
STKc_nPKC_eta 359..681 CDD:270742 119/360 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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