DRSC/TRiP Functional Genomics Resources

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Protein Alignment boca and Mesd

DIOPT Version :9

Sequence 1:NP_724578.1 Gene:boca / 48986 FlyBaseID:FBgn0004132 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_075892.3 Gene:Mesd / 67943 MGIID:1891421 Length:224 Species:Mus musculus


Alignment Length:177 Identity:86/177 - (48%)
Similarity:122/177 - (68%) Gaps:9/177 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLVLLLLALTPLVL--------AKKFKEEEKPAWAKKDIRDYSEADLERLLDQWEEDEEPLEDDE 60
            |.|||.|..:.|:|        |....|...|...|||||||::||:.|||:|||:|:: :|:.:
Mouse     8 RAVLLFLCASDLLLLPPPNAYAADTPGEATPPPRKKKDIRDYNDADMARLLEQWEKDDD-IEEGD 71

  Fly    61 LPEHLRPQPKLDLSNLDSKSPEDLLKVSKKGRTLMTFVSVTGNPTREESDTITKLWQTSLWNNHI 125
            ||||.||...:|.|.||...||.:||::|||:|||.||:|:||||.:|::.||.|||.||:|.:.
Mouse    72 LPEHKRPSAPIDFSKLDPGKPESILKMTKKGKTLMMFVTVSGNPTEKETEEITSLWQGSLFNANY 136

  Fly   126 QAERYMVDDNRAIFLFKDGTQAWDAKDFLIEQERCKGVTIENKEYPG 172
            ..:|::|..:||||:.:||:.||:.||||:.|:||..||:|.:.|||
Mouse   137 DVQRFIVGSDRAIFMLRDGSYAWEIKDFLVSQDRCAEVTLEGQMYPG 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bocaNP_724578.1 Mesd 31..178 CDD:287194 76/142 (54%)
MesdNP_075892.3 Chaperone domain. /evidence=ECO:0000269|PubMed:21397183 1..155 69/147 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..49 8/20 (40%)
Mesd 43..192 CDD:370866 76/142 (54%)
Escort domain. /evidence=ECO:0000269|PubMed:21397183 156..195 15/28 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 178..224 3/6 (50%)
Prevents secretion from ER 221..224
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850204
Domainoid 1 1.000 172 1.000 Domainoid score I3717
eggNOG 1 0.900 - - E1_KOG4357
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H11347
Inparanoid 1 1.050 176 1.000 Inparanoid score I4043
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG45813
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0007230
OrthoInspector 1 1.000 - - oto94618
orthoMCL 1 0.900 - - OOG6_107397
Panther 1 1.100 - - LDO PTHR17600
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4085
SonicParanoid 1 1.000 - - X5334
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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