DRSC/TRiP Functional Genomics Resources

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Protein Alignment boca and MESD

DIOPT Version :10

Sequence 1:NP_724578.1 Gene:boca / 48986 FlyBaseID:FBgn0004132 Length:180 Species:Drosophila melanogaster
Sequence 2:NP_055969.1 Gene:MESD / 23184 HGNCID:13520 Length:234 Species:Homo sapiens


Alignment Length:175 Identity:83/175 - (47%)
Similarity:121/175 - (69%) Gaps:8/175 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LVLLLLALTP----LVLAKKFKEEEK---PAWAKKDIRDYSEADLERLLDQWEEDEEPLEDDELP 62
            |:||||.|.|    .........:|.   |...|||||||::||:.|||:|||:|:: :|:.:||
Human    19 LLLLLLLLPPPGSCAAEGSPGTPDESTPPPRKKKKDIRDYNDADMARLLEQWEKDDD-IEEGDLP 82

  Fly    63 EHLRPQPKLDLSNLDSKSPEDLLKVSKKGRTLMTFVSVTGNPTREESDTITKLWQTSLWNNHIQA 127
            ||.||...:|.|.:|...||.:||::|||:|||.||:|:|:||.:|::.||.|||.||:|.:...
Human    83 EHKRPSAPVDFSKIDPSKPESILKMTKKGKTLMMFVTVSGSPTEKETEEITSLWQGSLFNANYDV 147

  Fly   128 ERYMVDDNRAIFLFKDGTQAWDAKDFLIEQERCKGVTIENKEYPG 172
            :|::|..:||||:.:||:.||:.||||:.|:||..||:|.:.|||
Human   148 QRFIVGSDRAIFMLRDGSYAWEIKDFLVGQDRCADVTLEGQVYPG 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bocaNP_724578.1 Mesd 31..179 CDD:462985 74/142 (52%)
MESDNP_055969.1 Chaperone domain. /evidence=ECO:0000250|UniProtKB:Q9ERE7 1..164 66/145 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..95 26/64 (41%)
Mesd 52..201 CDD:462985 74/142 (52%)
Escort domain. /evidence=ECO:0000250|UniProtKB:Q9ERE7 165..204 15/28 (54%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 187..234 3/6 (50%)
Prevents secretion from ER 231..234
Blue background indicates that the domain is not in the aligned region.

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