DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and RKF1

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_174268.7 Gene:RKF1 / 839853 AraportID:AT1G29750 Length:1021 Species:Arabidopsis thaliana


Alignment Length:459 Identity:106/459 - (23%)
Similarity:181/459 - (39%) Gaps:106/459 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 IPLNFVAEERSVNSEDW------FFENVLRKE---ADKLLLAEENPRGTFLVRPSEHNPNGYSLS 201
            |.|:| ||.|..|.|::      .|:..::::   .|..::.|.....|.:::|.......:.|:
plant   515 INLDF-AEIRFTNDENYNRLGRRLFDIYIQEKLVAKDFNIMDEAKGAQTPIIKPLTAYVTNHFLT 578

  Fly   202 VK-DWEDGRGYHVKHYRI-------------------KPLD------NGGYYIATNQTFPSLQAL 240
            :: .|. |:|    ..||                   ||.:      :.|.|||.....|.|...
plant   579 IRLSWA-GKG----TTRIPTRGVYGPIISAISIVSDSKPCERPKTGMSPGAYIAIGIGAPCLIIF 638

  Fly   241 VMAYSKENALGLCHILSRPCPKPQPQMWDLGPELRDKY--EIPRSEIQL------------LRKL 291
            ::.:     |.:|..|.| |          |.:.:|.|  |:|.....|            ..|:
plant   639 ILGF-----LWICGCLPR-C----------GRQRKDPYEEELPSGTFTLRQIKFATDDFNPTNKI 687

  Fly   292 GRGNFGEVFYGKWRNSIDVAVKTL----REGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEP 352
            |.|.||.||.|...:...||||.|    |:|...   ||.|...:...:|..||.|:..|.:...
plant   688 GEGGFGAVFKGVLADGRVVAVKQLSSKSRQGNRE---FLNEIGAISCLQHPNLVKLHGFCVERAQ 749

  Fly   353 IYIVQEYMSKGSLLDFLREGDGRYLHFE--DLIYIATQVASGMEYLESK---QLIHRDLAARNVL 412
            :.:..|||...||...|.....:.:..:  ....|...:|.|:.:|..:   :.:|||:.|.|:|
plant   750 LLLAYEYMENNSLSSALFSPKHKQIPMDWPTRFKICCGIAKGLAFLHEESPLKFVHRDIKATNIL 814

  Fly   413 IGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLME---- 473
            :.::...||.||||||:..:::..........:.:.|||..::|..:.|:||:|:|:|::|    
plant   815 LDKDLTPKISDFGLARLDEEEKTHISTKVAGTIGYMAPEYALWGYLTFKADVYSFGVLVLEIVAG 879

  Fly   474 --------------LFTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVP 524
                          |..:........|..:|::.     |:....:....:.:.::.|.|..|.|
plant   880 ITNSNFMGAGDSVCLLEFANECVESGHLMQVVDE-----RLRPEVDRKEAEAVIKVALVCSSASP 939

  Fly   525 EKRP 528
            ..||
plant   940 TDRP 943

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 2/3 (67%)
SH2_Src_family 158..259 CDD:199827 24/135 (18%)
STYKc 285..537 CDD:214568 69/283 (24%)
PTKc_Src_like 289..538 CDD:270630 68/267 (25%)
RKF1NP_174268.7 LRR 112..395 CDD:227223
leucine-rich repeat 125..147 CDD:275380
leucine-rich repeat 148..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..218 CDD:275380
leucine-rich repeat 219..242 CDD:275380
leucine-rich repeat 243..266 CDD:275380
leucine-rich repeat 267..287 CDD:275380
leucine-rich repeat 291..314 CDD:275380
leucine-rich repeat 315..337 CDD:275380
leucine-rich repeat 338..356 CDD:275380
Malectin 417..604 CDD:288557 19/94 (20%)
STYKc 686..952 CDD:214568 68/266 (26%)
STKc_IRAK 687..955 CDD:270968 67/265 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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