DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and grapa

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001018409.1 Gene:grapa / 553596 ZFINID:ZDB-GENE-050522-347 Length:214 Species:Danio rerio


Alignment Length:194 Identity:58/194 - (29%)
Similarity:91/194 - (46%) Gaps:25/194 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERSVNSEDWFFE 165
            ||||::.:.:..:|||.|||.:::.:..:...|.......| :|.:|.|::    |:....||..
Zfish     4 VALYNFCATESDELSFQKGDVLKITNMEDDPNWYTAEFVNR-KGYVPKNYI----SL
RPHAWFAG 63

  Fly   166 NVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNGGYYIAT 230
            .:.|..|:..|  .:...|:||||.||..|..:|:||     ..|.||:|:::.. |..|||...
Zfish    64 RISRHVAENRL--HQRDCGSFLVRESESAPGEFSMSV-----SYGDHVQHFKVLK-DREGYYFVW 120

  Fly   231 NQTFPSLQALVMAYSKENALG---------LCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEI 285
            .:.||||..||..| |.|::.         |.|.|.|  |.....::|..||...:....|.::
Zfish   121 EEIFPSLNQLVDFY-KTNSIAKERTVFLRD
LDHTLKR--PHHAHALFDFNPEHNSQLHFLRGDV 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 14/48 (29%)
SH2_Src_family 158..259 CDD:199827 36/109 (33%)
STYKc 285..537 CDD:214568 0/1 (0%)
PTKc_Src_like 289..538 CDD:270630
grapaNP_001018409.1 SH3 2..55 CDD:302595 15/55 (27%)
SH2_Grb2_like 56..149 CDD:199828 33/101 (33%)
SH3_GRB2_like_C 159..211 CDD:212739 4/23 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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