DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and Bmx

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001102486.1 Gene:Bmx / 367786 RGDID:1565643 Length:655 Species:Rattus norvegicus


Alignment Length:534 Identity:183/534 - (34%)
Similarity:267/534 - (50%) Gaps:86/534 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 DPNHRGP------LKIGGKGGVDIIRPRTTPTGVPGVVLK------RVVVALYD------YKSRD 110
            |..||.|      |||          ||..|      :||      ..:...||      |.|:.
  Rat   162 DEKHRAPTFPERILKI----------PRAVP------ILKMDASSSSAIPPQYDSHLKKSYDSQP 210

  Fly   111 ESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQE----GLIPLNFVA-----------------EE 154
            ..::.::..:..       .|||::....:.::    ..:..|.|:                 ||
  Rat   211 TVNIRYIPREDC-------PDWWQIRKPKSEEDIARSNQLERNIVSHSPSKMSWGFPESSSSEEE 268

  Fly   155 RSVNSEDWFFENVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSV--KDWEDGRGYHVKHYR 217
            .::::.|||..|:.|.:::: ||.::...|.|:||.|. ....|::|:  |...|.:| .||||.
  Rat   269 ENLDAYDWFAGNISRSQSEQ-LLRQKGKEGAFMVRNSS-QMGMYTVSLFSKAVNDKKG-TVKHYH 330

  Fly   218 IKPLDNGGYYIATNQTFPSLQALVMAYSKENALGLCHILSRPC---PKPQPQMWDLGPELRDKYE 279
            :........|:|.|..|.|:..|: .|.:.|:.|:...|..|.   ....|....||..:   :|
  Rat   331 VHTNAENKLYLAENYCFDSIPKLI-HYHQHNSAGMITRLRHPVSTKANKVPVSVALGSGI---WE 391

  Fly   280 IPRSEIQLLRKLGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALY 344
            :.|.||.||::||.|.||.|..|||:....||||.::||.||...|.|||..|.|..|.:||..|
  Rat   392 LKREEIALLKELGSGQFGVVQLGKWKGQYSVAVKMIKEGAMSEDEFFQEAQTMMKLSHPKLVKFY 456

  Fly   345 AVCSQEEPIYIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAAR 409
            .|||::.|||||.||::.|.||::|: ..|:.|....|:.:...|..||.:|||.|.||||||||
  Rat   457 GVCSKKYPIYIVTEYITNGCLLNYLK-NHGKGLESSQLLEMCYDVCEGMAFLESHQFIHRDLAAR 520

  Fly   410 NVLIGENNVAKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMEL 474
            |.|:..:...|:.|||:.|.:.||:|....|::|||||:|||...|.|:|.|||||::|||:.|:
  Rat   521 NCLVDSDLSVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEV 585

  Fly   475 FTYGQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFES 539
            |:.|:.||....:.||:..:.:|.|:.:|  ....|.|||::..||..:|||||||:.|....| 
  Rat   586 FSLGKQPYDLYDNSEVVVKVSQGHRLYRP--QLASDTIYQIMYSCWHELPEKRPTFQQLLSAIE- 647

  Fly   540 FSVTSEVPYREVQD 553
                   |.|| ||
  Rat   648 -------PLRE-QD 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 7/60 (12%)
SH2_Src_family 158..259 CDD:199827 31/102 (30%)
STYKc 285..537 CDD:214568 116/251 (46%)
PTKc_Src_like 289..538 CDD:270630 113/248 (46%)
BmxNP_001102486.1 PH_Btk 25..151 CDD:269944
PH 27..115 CDD:278594
SH2_Tec_Bmx 269..374 CDD:198262 32/108 (30%)
PKc_like 392..647 CDD:304357 118/257 (46%)
Pkinase_Tyr 397..646 CDD:285015 116/251 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.810

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