DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and Abl1

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001094320.1 Gene:Abl1 / 311860 RGDID:1584969 Length:1143 Species:Rattus norvegicus


Alignment Length:452 Identity:189/452 - (41%)
Similarity:282/452 - (62%) Gaps:18/452 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 VALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERSVNSEDWFFE 165
            |||||:.:..::.||..||:::.|:....:..|.... |...:|.:|.|::....|:....|:..
  Rat    86 VALYDFVASGDNTLSITKGEKLRVLGYNHNGEWCEAQ-TKNGQGWVPSNYITP
VNSLEKHSWYHG 149

  Fly   166 NVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNGGYYIAT 230
            .|.|..|:.||.:..|  |:||||.||.:|...|:|::  .:||.|   ||||....:|..|:::
  Rat   150 PVSRNAAEYLLSSGIN--GSFLVRESESSPGQRSISLR--YEGRVY---HYRINTASDGKLYVSS 207

  Fly   231 NQTFPSLQALVMAYSKENALGLCHILSRPCPK-PQPQMWDLGPELRDKYEIPRSEIQLLRKLGRG 294
            ...|.:|..||..:|.. |.||...|..|.|| .:|.::.:.|.. ||:|:.|::|.:..|||.|
  Rat   208 ESRFNTLAELVHHHSTV-ADGLITTLHYP
APKRNKPTIYGVSPNY-DKWEMERTDITMKHKLGGG 270

  Fly   295 NFGEVFYGKWRN-SIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQE 358
            .:|||:.|.|:. |:.||||||:|.||....||:|||:||:.:|..||.|..||::|.|.||:.|
  Rat   271 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 335

  Fly   359 YMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICD 423
            :|:.|:|||:|||.:.:.:....|:|:|||::|.|||||.|..|||||||||.|:|||::.|:.|
  Rat   336 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVAD 400

  Fly   424 FGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSR 488
            |||:|::..|.|....|::||:||||||::.|.|||||||||::|:||.|:.|||..||||:...
  Rat   401 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS 465

  Fly   489 EVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFESF----SVTSEV 546
            :|.|.:|:.:||.:|..  .|:.:|:|:..||...|..||:|..::..||:.    |::.||
  Rat   466 QVYELLEKDYRMERPEG--CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEV 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 14/48 (29%)
SH2_Src_family 158..259 CDD:199827 35/100 (35%)
STYKc 285..537 CDD:214568 124/252 (49%)
PTKc_Src_like 289..538 CDD:270630 123/249 (49%)
Abl1NP_001094320.1 SH3_Abl 84..137 CDD:212784 15/51 (29%)
SH2_ABL 142..235 CDD:198189 35/100 (35%)
PTKc_Abl 254..516 CDD:270645 128/263 (49%)
Pkinase_Tyr 261..512 CDD:285015 124/252 (49%)
FABD 1019..1143 CDD:197885
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X88
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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