DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and Srms

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001011961.1 Gene:Srms / 296472 RGDID:1306602 Length:507 Species:Rattus norvegicus


Alignment Length:439 Identity:196/439 - (44%)
Similarity:271/439 - (61%) Gaps:19/439 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLT-TRQEGLIPLNFVAE--ERSVNS 159
            |:..||||:.:|...:||..:|||:..:.: |.::.....|: ....||:|:.::|:  ..:.:.
  Rat    69 RLFRALYDFTARCAEELSVSRGDRLYALKE-EGEYIFAQRLSGPPSTGLVPVTYLAKATPETPSD 132

  Fly   160 EDWFFENVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNG 224
            :.|:|..:.|.:|.:|||:..|..|.||:||||.:..||||||:     ....|.||||....:|
  Rat   133 QPWYFNGISRTQAQQLLLSPANAPGAFLIRPSESSIGGYSLSVR-----AQAKVCHYRICMAPSG 192

  Fly   225 GYYIATNQTFPSLQALVMAYSKENALGLCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEIQLLR 289
            |.|:...:.||||.|| :||.|.|...:.:.|.:||   .|||    |..:|::|.||||..|.|
  Rat   193 GLYLQEGRLFPSLDAL-LAYYKTNWKLIQNPLLQPC---VPQM----PLAQDEWERPRSEFVLRR 249

  Fly   290 KLGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIY 354
            |||.|.||||:.|.|..|..||||.::...|..|...:|...:|..||.||:.|:|:||..||:|
  Rat   250 KLGEGFFGEVWEGLWLGSTPVAVKVIKSADMKLADLTKEIEALKSLRHERLIRLHAICSLGEPVY 314

  Fly   355 IVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVA 419
            ||.|.|.||:|..:|...:|:.|....|:..|.|||.||.|||.::::||||||||||:|::...
  Rat   315 IVTELMGKGNLQVYLGSPEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTC 379

  Fly   420 KICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPG 484
            |:.||||||::.||.|.|..||:.|||||||||..|..||.||||||:||||.|:|||||.||.|
  Rat   380 KVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEG 444

  Fly   485 MHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFL 533
            |.:.|.::.|.||:|:|:|.  ..|..:|.|:::||...||:||||..|
  Rat   445 MTNHETLQQISRGYRLPRPA--VCPAEVYMLMVECWKGSPEERPTFATL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 15/51 (29%)
SH2_Src_family 158..259 CDD:199827 40/100 (40%)
STYKc 285..537 CDD:214568 127/249 (51%)
PTKc_Src_like 289..538 CDD:270630 126/245 (51%)
SrmsNP_001011961.1 SH3 70..124 CDD:302595 15/54 (28%)
SH2 134..212 CDD:301589 36/83 (43%)
PTKc_Srm_Brk 238..498 CDD:133248 132/256 (52%)
Pkinase_Tyr 245..495 CDD:285015 127/249 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.820

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