DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and Srms

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_035611.3 Gene:Srms / 20811 MGIID:101865 Length:507 Species:Mus musculus


Alignment Length:439 Identity:197/439 - (44%)
Similarity:271/439 - (61%) Gaps:19/439 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 RVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLT-TRQEGLIPLNFVAE--ERSVNS 159
            |:..||||:.:|...:||..:|||:..:.: |.|:.....|: ....||:|:.::|:  ....:.
Mouse    69 RLFRALYDFTARCAEELSVSRGDRLYALKE-EGDYIFAQRLSGPPSTGLVPVTYLAKATPEPPSD 132

  Fly   160 EDWFFENVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNG 224
            :.|:|..:.|.:|.:|||:..|..|.||:||||.:..||||||:     ....|.||||....:|
Mouse   133 QPWYFSGISRAQAQQLLLSPANAPGAFLIRPSESSIGGYSLSVR-----AQAKVCHYRICMAPSG 192

  Fly   225 GYYIATNQTFPSLQALVMAYSKENALGLCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEIQLLR 289
            ..|:...|.||||.|| :||.|.|...:.:.|.:||   .||:    |.::|::|.||||..|.|
Mouse   193 SLYLQEGQLFPSLDAL-LAYYKTNWKLIQNPLLQPC---IPQI----PLVQDEWERPRSEFVLRR 249

  Fly   290 KLGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIY 354
            |||.|.||||:.|.|..||.||||.::...|..|...:|...:|..||.||:.|:|:||..||:|
Mouse   250 KLGEGFFGEVWEGLWLGSIPVAVKVIKSADMKLADLTKEIEALKSLRHERLIRLHAICSLGEPVY 314

  Fly   355 IVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVA 419
            ||.|.|.||:|..:|...:|:.|....|:..|.|||.||.|||.::::||||||||||:|::...
Mouse   315 IVTELMGKGNLQVYLGSSEGKALSLPHLLGFACQVAEGMSYLEERRVVHRDLAARNVLVGDDLTC 379

  Fly   420 KICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPG 484
            |:.||||||::.||.|.|..||:.|||||||||..|..||.||||||:||||.|:|||||.||.|
Mouse   380 KVADFGLARLLKDDVYSPSSGSKIPVKWTAPEAANYRVFSQKSDVWSFGILLYEVFTYGQCPYEG 444

  Fly   485 MHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFL 533
            |.:.|.::.|.||:|:|:|.  ..|..:|.|:::||...||:||||..|
Mouse   445 MTNHETLQQISRGYRLPRPA--VCPAEVYVLMVECWKGSPEERPTFAIL 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 16/51 (31%)
SH2_Src_family 158..259 CDD:199827 40/100 (40%)
STYKc 285..537 CDD:214568 128/249 (51%)
PTKc_Src_like 289..538 CDD:270630 127/245 (52%)
SrmsNP_035611.3 SH3 70..124 CDD:302595 16/54 (30%)
SH2_Srm 134..212 CDD:198223 36/83 (43%)
PTKc_Srm_Brk 238..498 CDD:133248 133/256 (52%)
STYKc 246..495 CDD:214568 128/248 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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