DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src64B and fgr

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_002934688.1 Gene:fgr / 100493811 XenbaseID:XB-GENE-6073541 Length:519 Species:Xenopus tropicalis


Alignment Length:507 Identity:253/507 - (49%)
Similarity:345/507 - (68%) Gaps:19/507 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 NGGSLDSRYTPDPNHRGPLKI---------GGKGGVDI-IRPRTTPTGVPGVVLKRVVVALYDYK 107
            |...:..||.|||..:.|.:|         .|.|||.. ...|....||.|.|.:  .:|||||.
 Frog    17 NALEIPQRYCPDPTSQMPFRIQETHTPFISAGIGGVIAGSSQRGMGVGVTGGVTQ--FIALYDYD 79

  Fly   108 SRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERSVNSEDWFFENVLRKEA 172
            :|.|.||:|.||::..:|:::|.|||...:|::...|.||.|:||...|:.|:||:|..:.||:|
 Frog    80 ARTEDDLTFKKGEKFHIINNSEGDWWEARSLSSGNTGYIPSNYVAPMNSIQSKDWYFGKIGRKDA 144

  Fly   173 DKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDNGGYYIATNQTFPSL 237
            ::|||.|.||||||::|.||.....|||||:||:..||.|.|||:|:.|||||:||.|...|.::
 Frog   145 ERLLLCEGNPRGTFMIRESETTKGAYSLSVRDWDATRGDHAKHYKIRKLDNGGFYITTRVQFDTV 209

  Fly   238 QALVMAYSKENALGLCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEIQLLRKLGRGNFGEVFYG 302
            :.||..||:.|. ||||:|:.||...:||...|.   :|.:||.|..|.|.:|||:|.||:|:.|
 Frog   210 EELVEHYSEFND-GLCHLLTNPCINQKPQTLGLS---KDAWEITRDSISLDKKLGQGCFGDVWKG 270

  Fly   303 KWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPIYIVQEYMSKGSLLD 367
            .|..:.:||||||:..|||..|||:||.||||.||::||.||||.| |||||||.|:|:||||||
 Frog   271 TWNGTTNVAVKTLKPSTMSPEAFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEFMTKGSLLD 334

  Fly   368 FLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNVAKICDFGLARVIAD 432
            :|:||:|..|....|:.::.|:||||.|:|....|||||.|.|:|:|:|.:.||.||||||:|.|
 Frog   335 YLKEGEGHLLKLPQLVDMSGQIASGMAYIERMNYIHRDLRAANILVGDNLICKIADFGLARLIED 399

  Fly   433 DEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYPGMHSREVIENIERG 497
            :||..:||::||:|||||||.:||||:|||||||:||::.||.|.|::|||||.:|||:|.:|||
 Frog   400 NEYTARQGAKFPIKWTAPEAALYGKFTIKSDVWSFGIMVCELVTKGRIPYPGMSNREVLEQVERG 464

  Fly   498 FRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFESFSVTSEVPYR 549
            :|||.|.  ..|.::::|:||||...||:|||||:|..:.|.:...:|..|:
 Frog   465 YRMPAPP--ACPPSLHELMLQCWRGDPEERPTFEYLQSFLEDYFTATEPQYQ 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 21/50 (42%)
SH2_Src_family 158..259 CDD:199827 53/100 (53%)
STYKc 285..537 CDD:214568 146/251 (58%)
PTKc_Src_like 289..538 CDD:270630 144/248 (58%)
fgrXP_002934688.1 SH3 72..125 CDD:388381 23/52 (44%)
SH2_Src_Fgr 130..230 CDD:198230 53/100 (53%)
PTKc_Src_Fyn_like 257..504 CDD:271105 144/249 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6746
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR24418
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

Return to query results.
Submit another query.