DRSC/TRiP Functional Genomics Resources

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Protein Alignment Src64B and fyn

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:XP_004914619.2 Gene:fyn / 100488004 XenbaseID:XB-GENE-6053489 Length:537 Species:Xenopus tropicalis


Alignment Length:521 Identity:256/521 - (49%)
Similarity:349/521 - (66%) Gaps:39/521 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FGQTHINSSGGGNM-GGVLGQKHNNGGSLDSRYTPDPNHRGPLKIGGKGGVDIIRPRTTPTGVPG 93
            :...|.|:..|..: |||      |..|          |.|.|:..|..||.:.           
 Frog    50 YNNFHTNAGQGLTVFGGV------NSSS----------HTGTLRTRGGTGVTLF----------- 87

  Fly    94 VVLKRVVVALYDYKSRDESDLSFMKGDRMEVIDDTESDWWRVVNLTTRQEGLIPLNFVAEERSVN 158
                   ||||||::|.|.||||.||::.::::.:|.|||...:|||...|.||.|:||...|:.
 Frog    88 -------VALYDYEARTEDDLSFQKGEKFQILNSSEGDWWEARSLTTGGTGYIPSNYVAPVDSIQ 145

  Fly   159 SEDWFFENVLRKEADKLLLAEENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHYRIKPLDN 223
            :|:|:|..:.||:|::.||:..|||||:|:|.||.....||||::||:|.:|.|||||:|:.|||
 Frog   146 AEEWYFGKLGRKDAERQLLSFGNPRGTYLIRESETTKGAYSLSIRDWDDMKGDHVKHYKIRKLDN 210

  Fly   224 GGYYIATNQTFPSLQALVMAYSKENALGLCHILSRPCPKPQPQMWDLGPELRDKYEIPRSEIQLL 288
            |||||.|...|.:||.||..|| |.|.|||..|..||.|..|::.||..:.:|.:||||..:||:
 Frog   211 GGYYITTRAQFETLQQLVQHYS-ERAAGLCCRLVVPCHKGMPRLTDLSVKTKDVWEIPRESLQLI 274

  Fly   289 RKLGRGNFGEVFYGKWRNSIDVAVKTLREGTMSTAAFLQEAAIMKKFRHNRLVALYAVCSQEEPI 353
            ::||.|.||||:.|.|..:..||:|||:.||||..:||:||.||||.:|::||.||||.| ||||
 Frog   275 KRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVS-EEPI 338

  Fly   354 YIVQEYMSKGSLLDFLREGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDLAARNVLIGENNV 418
            |||.||||||||||||::|:||.|...:|:.:|.|||:||.|:|....|||||.:.|:|:|...:
 Frog   339 YIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLI 403

  Fly   419 AKICDFGLARVIADDEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGILLMELFTYGQVPYP 483
            .||.||||||:|.|:||..:||::||:|||||||.:||:|:|||||||:||||.||.|.|:||||
 Frog   404 CKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYP 468

  Fly   484 GMHSREVIENIERGFRMPKPTNHYFPDNIYQLLLQCWDAVPEKRPTFEFLNHYFESFSVTSEVPY 548
            ||::|||:|.:|||:|||.|.:  .|:::::|:|.||...||:|||||:|..:.|.:...:|..|
 Frog   469 GMNNREVLEQVERGYRMPCPQD--CPNSLHELMLNCWKKDPEERPTFEYLQGFLEDYFTATEPQY 531

  Fly   549 R 549
            :
 Frog   532 Q 532

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 24/50 (48%)
SH2_Src_family 158..259 CDD:199827 53/100 (53%)
STYKc 285..537 CDD:214568 147/251 (59%)
PTKc_Src_like 289..538 CDD:270630 145/248 (58%)
fynXP_004914619.2 SH3_Fyn_Yrk 85..140 CDD:212939 26/72 (36%)
SH2_Src_Fyn_isoform_a_like 145..245 CDD:198281 53/100 (53%)
PTKc_Fyn 261..534 CDD:270655 155/275 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 102 1.000 Domainoid score I6746
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D248674at33208
OrthoFinder 1 1.000 - - FOG0000006
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24418
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
44.110

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