DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Src64B and Tyk2

DIOPT Version :9

Sequence 1:NP_001286937.1 Gene:Src64B / 48973 FlyBaseID:FBgn0262733 Length:553 Species:Drosophila melanogaster
Sequence 2:NP_001244276.1 Gene:Tyk2 / 100361294 RGDID:2320469 Length:1186 Species:Rattus norvegicus


Alignment Length:603 Identity:158/603 - (26%)
Similarity:241/603 - (39%) Gaps:180/603 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 HRGPLKIGG--KGGVDIIRPRTTPTGVPG-----------VVLK-------RVVVALYDYKSR-- 109
            :.|.|.:||  :|.||        :|.|.           ||||       .:.:|.|:..|.  
  Rat   606 YEGLLSVGGPNEGKVD--------SGCPSGPDRGSGQQLRVVLKVLDPSHHDIALAFYETASLMS 662

  Fly   110 --DESDLSFMKGDRM---------EVIDDTESDWWRVVNLTTRQEGLIPLNF---VAEERS---- 156
              ....|:|:.|..:         |.::....|.|     ..||.|.:|:.:   ||::.:    
  Rat   663 QVSHMHLAFLHGVCVRGSENIIVAEFVEHGPLDVW-----LRRQRGRVPMPWKMVVAQQLASALS 722

  Fly   157 -VNSEDWFFENVLRKEADKLLLA----EENPRGTFLVRPSEHNPNGYSLSVKDWEDGRGYHVKHY 216
             :..::....||..:   .:|||    ||   ||        ||   .:.:.|...|:|...:..
  Rat   723 YLEDKNLVHGNVCGR---NILLARLGLEE---GT--------NP---FIKLSDPGVGQGALSREE 770

  Fly   217 RIKP--------LDNGGYYIATNQTFPSLQALVMA--------------------YSKENAL--G 251
            |::.        |..|...:.|........|.::.                    |:|::.|  .
  Rat   771 RVERIPWTAPECLSGGANSLGTATDMWGFGATLLEICFDGEAPLQGRGPSEKERFYTKKHQLPEP 835

  Fly   252 LC---HILSRPC----PKPQPQMWDLGPELRD---------------KYEIPRSE--------IQ 286
            .|   ..|:|.|    |..:|....:   |||               ..:.|.|:        ::
  Rat   836 SCPELATLTRQCLSYEPAQRPSFRTI---LRDLTRLQPQNLVGTSTVNSDSPASDPTVFHKRYLK 897

  Fly   287 LLRKLGRGNFGEVFYGKWRNSID-----VAVKTLRE--GTMSTAAFLQEAAIMKKFRHNRLVALY 344
            .:|.||.|:||:|....:..:.|     ||||.|:|  |....:.:.:|..|::...|..:|...
  Rat   898 RIRDLGEGHFGKVSLYCYDPNNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYK 962

  Fly   345 AVCSQ--EEPIYIVQEYMSKGSLLDFL-REGDGRYLHFEDLIYIATQVASGMEYLESKQLIHRDL 406
            ..|..  |:.:.:|.||:..|||.|:| |...|    ...|:..|.|:..||.||.::..|||||
  Rat   963 GCCEDQGEKSVQLVMEYVPLGSLRDYLPRHSVG----LAQLLLFAQQICEGMAYLHAQHYIHRDL 1023

  Fly   407 AARNVLIGENNVAKICDFGLARVIAD--DEYCPKQGSRFPVKWTAPEAIIYGKFSIKSDVWSYGI 469
            ||||||:..:.:.||.|||||:.:.:  :.|..::....||.|.|||.:...||...|||||:|:
  Rat  1024 AARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKECKFYYASDVWSFGV 1088

  Fly   470 LLMELFTY-------------------GQVPYPGMHSREVIENIERGFRMPKPTNHYFPDNIYQL 515
            .|.||.||                   ||     |....:.|.:|||.|:|:|..  .|..||.|
  Rat  1089 TLYELLTYCDSSQSPPTKFIELIGVTQGQ-----MTVLRLTELLERGERLPRPDR--CPCEIYHL 1146

  Fly   516 LLQCWDAVPEKRPTFEFL 533
            :..||::....||||:.|
  Rat  1147 MKNCWESEASFRPTFQNL 1164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Src64BNP_001286937.1 SH3_Src_like 99..150 CDD:212779 13/63 (21%)
SH2_Src_family 158..259 CDD:199827 24/137 (18%)
STYKc 285..537 CDD:214568 97/280 (35%)
PTKc_Src_like 289..538 CDD:270630 97/276 (35%)
Tyk2NP_001244276.1 FERM_F1 33..130 CDD:408179
FERM_F2 148..271 CDD:408177
Jak1_Phl 290..433 CDD:407742
SH2 438..536 CDD:417686
PKc_like 591..866 CDD:419665 59/292 (20%)
PTKc_Tyk2_rpt2 891..1173 CDD:270664 97/285 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0197
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.