DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atpalpha and SPF1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_010883.3 Gene:SPF1 / 856681 SGDID:S000000757 Length:1215 Species:Saccharomyces cerevisiae


Alignment Length:1132 Identity:233/1132 - (20%)
Similarity:403/1132 - (35%) Gaps:324/1132 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKN-------LFGGFAMLLWIGAI 127
            :|:.:.| ...|:|.|     ...|.|:...|  .|.:::..|.       :|..|.:.||:  :
Yeast   160 FQKCKGH-SGDLTHLK-----RLYGENSFDIP--IPTFMELFKEHAVAPLFVFQVFCVALWL--L 214

  Fly   128 LCFVAYSIQASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNM--VPQFATVI 190
            ..|..||:          .||::.|.:.|..:...:.:          ::.|:.|  .|....|.
Yeast   215 DEFWYYSL----------FNLFMIISMEAAAVFQRLTA----------LKEFRTMGIKPYTINVF 259

  Fly   191 REGEKLTLRAEDLVLGDVVEV---KFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHE 252
            |..:.:.|:..:|:..|:|.:   .....||.|:.:::.... |:.:.|:|||.|..:  |....
Yeast   260 RNKKWVALQTNELLPMDLVSITRTAEESAIPCDLILLDGSAI-VNEAMLSGESTPLLK--ESIKL 321

  Fly   253 NPLETKNLAFFSTNAV---EGTAKGVVISCGDHTV-------MGRIAGLA-SGLDTGETPIAKEI 306
            .|.| .||.....:.:   .|..|.:.::..:|..       .|.:|.:. :|.:|.:..:.:.:
Yeast   322 RPSE-DNLQLDGVDKIAVLHGGTKALQVTPPEHKSDIPPPPDGGALAIVTKTGFETSQGSLVRVM 385

  Fly   307 HHFIHLITGVAV-----FLGVTFFVIAFILG--YHWLDA----------VIFLIGIIVANVPEGL 354
               |:....|:|     .:.:.|.:|..::.  |.|::.          ::..|.||.:.||..|
Yeast   386 ---IYSAERVSVDNKEALMFILFLLIFAVIASWYVWVEGTKMGRIQSKLILDCILIITSVVPPEL 447

  Fly   355 LATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEAD 419
            ...:|:.:..:...:|...........:...|.....|.|||||||...:..             
Yeast   448 PMELTMAVNSSLAALAKFYVYCTEPFRIPFAGRIDVCCFDKTGTLTGEDLVF------------- 499

  Fly   420 TTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGG--------------QDGVPILKKEVSGDAS 470
              |..:|:..|.        ..|..|.:.||....              :||      ::.||..
Yeast   500 --EGLAGISADS--------ENIRHLYSAAEAPESTILVIGAAHALVKLEDG------DIVGDPM 548

  Fly   471 EAALLKCMELALGDVMNIRKRNKK--------IAEVPFNSTNKYQVSIHETEDTNDPRYLLVMKG 527
            |.|.||    |:|..:..:..|.:        |....|:|..|...||   ...||..:..| ||
Yeast   549 EKATLK----AVGWAVERKNSNYREGTGKLDIIRRFQFSSALKRSASI---ASHNDALFAAV-KG 605

  Fly   528 APERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTD 592
            |||.|.||.|.|..|             ::..|......|.|||......||..........|.|
Yeast   606 APETIRERLSDIPKN-------------YDEIYKSFTRSGSRVLALASKSLPKMSQSKIDDLNRD 657

  Fly   593 DINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGII----- 652
            |:.   ..|.|.|.:....|.:....:.:.....:..:.||:|||:|:||..:||.|||:     
Yeast   658 DVE---SELTFNGFLIFHCPLKDDAIETIKMLNESSHRSIMITGDNPLTAVHVAKEVGIVFGETL 719

  Fly   653 -------SEGNETV-EDIAQRLNIPV---------SEVNPREAKAAVVHGAELRDVSS-DQLDEI 699
                   |:.|:.: .|:.:.::||.         |::..|...|  |.|..|..:.. .||.::
Yeast   720 ILDRAGKSDDNQLLFRDVEETVSIPFDPSKDTFDHSKLFDRYDIA--VTGYALNALEGHSQLRDL 782

  Fly   700 LRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAA 764
            || || .|:||.||.||..::...:.||....:.|||.||..|||:|.:|:|             
Yeast   783 LR-HT-WVYARVSPSQKEFLLNTLKDMGYQTLMCGDGTNDVGALKQAHVGIA------------- 832

  Fly   765 DMILLDDNFASIVTGVEEG--------RLIFDNLK----KSIAYTLTSNIPE--ISPFLAFILCD 815
                       ::.|.|||        ||  :.:|    |...:....|.|:  :...:|.:.  
Yeast   833 -----------LLNGTEEGLKKLGEQRRL--EGMKMMYIKQTEFMARWNQPQPPVPEPIAHLF-- 882

  Fly   816 IPLPLGTVTILCID-LGTDMVPAISLAYEHAEA---DIMK------RPPRD-------------- 856
            .|.|.....:..:: .||.:.|.|..|.|.|.:   :::|      :.|.|              
Yeast   883 PPGPKNPHYLKALESKGTVITPEIRKAVEEANSKPVEVIKPNGLSEKKPADLASLLLNSAGDAQG 947

  Fly   857 ---------------PFNDKLVNSRLIS--MAYGQIGMIQA------------AAGFFVYFVIMA 892
                           ||..||.|...::  :..|:..::..            .:.:.:..:.||
Yeast   948 DEAPALKLGDASCAAPFTSKLANVSAVTNIIRQGRCALVNTIQMYKILALNCLISAYSLSIIYMA 1012

  Fly   893 ----------ENGFLPKKLF-------------------GIRKMW------DSKAVNDLTDSYGQ 922
                      .:|.|....|                   ||..::      ...||:..|..|..
Yeast  1013 GVKFGDGQATVSGLLLSVCFLSISRGKPLEKLSKQRPQSGIFNVYIMGSILSQFAVHIATLVYIT 1077

  Fly   923 EWTYR----------DRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMR-NWALNFGL 976
            ...|:          :::......:|..||..:|.|.:...:  ..:...|::.:| |..:.:||
Yeast  1078 TEIYKLEPREPQVDLEKEFAPSLLNTGIFIIQLVQQVSTFAV--NYQGEPFRENIRSNKGMYYGL 1140

  Fly   977 VFET--VLAAFLSYCPGMEKGLRMYPL 1001
            :..|  .||:...:.|.:.:.::..|:
Yeast  1141 LGVTGLALASATEFLPELNEAMKFVPM 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 233/1132 (21%)
Cation_ATPase_N 58..132 CDD:214842 15/68 (22%)
E1-E2_ATPase 152..383 CDD:278548 47/263 (18%)
Cation_ATPase 445..539 CDD:289987 32/115 (28%)
COG4087 <695..770 CDD:226572 26/74 (35%)
Cation_ATPase_C 817..1025 CDD:279079 45/286 (16%)
SPF1NP_010883.3 P-type_ATPase_cation 169..1136 CDD:319843 224/1089 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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