DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and PMA2

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_015289.1 Gene:PMA2 / 856071 SGDID:S000005957 Length:947 Species:Saccharomyces cerevisiae


Alignment Length:1031 Identity:252/1031 - (24%)
Similarity:428/1031 - (41%) Gaps:235/1031 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 ATDDDNRTADGQYKSRRKMPAKV---------NKKENLDDLKQELDIDF---------------- 61
            ::...:.|:.....|...:|.|.         :..|::|.|..||..::                
Yeast    33 SSSSSSSTSTSASSSAAAVPRKAAAASAADDSDSDEDIDQLIDELQSNYGEGDESGEEEVRTDGV 97

  Fly    62 ---HKISPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLW 123
               .::.||   :...|.|..||:..:.....::.|.|.:....:: ..|||.....|....::.
Yeast    98 HAGQRVVPE---KDLSTDPAYGLTSDEVARRRKKYGLNQMAEENES-LIVKFLMFFVGPIQFVME 158

  Fly   124 IGAILCFVAYSIQASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFAT 188
            ..|||.       |..|     |.:.:| |:.|::::.....:.||.::..|::..|..:...||
Yeast   159 AAAILA-------AGLS-----DWVDVG-VICALLLLNASVGFIQEFQAGSIVDELKKTLANTAT 210

  Fly   189 VIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNF-KVDNSSLTGESEPQSR--GAEFT 250
            |||:|:.:.:.|.::|.|::::::.|...|||.||:....| ::|.|::||||....:  |.|  
Yeast   211 VIRDGQLIEIPANEVVPGEILQLESGTIAPADGRIVTEDCFLQIDQSAITGESLAAEKHYGDE-- 273

  Fly   251 HENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIA---GLASGLDTGETPIAKEIHHFIHL 312
                      .|.|:....|.|..||.:.||:|.:||.|   |.|||::          .||..:
Yeast   274 ----------VFSSSTVKTGEAFMVVTATGDNTFVGRAAALVGQASGVE----------GHFTEV 318

  Fly   313 ITGVAVFLGVTFFVIAFIL------GYHWLDAVIFL---IGIIVANVPEGLLATVTVCLTLTAKR 368
            :.|:.:.|.|  .|||.:|      .|..:..|..|   :||.:..||.||.|.||..:.:.|..
Yeast   319 LNGIGIILLV--LVIATLLLVWTACFYRTVGIVSILRYTLGITIIGVPVGLPAVVTTTMAVGAAY 381

  Fly   369 MASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTS 433
            :|.|..:|:.|.|:|:|.....:|||||||||:|:::: |        |..|.|   ||..|   
Yeast   382 LAKKQAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSL-H--------EPYTVE---GVSPD--- 431

  Fly   434 PGFKALSRIATLCNRAEFKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRKRNKKIAEV 498
                  ..:.|.|..|.           :|:...||.:.|.||.: :......:...:.|.:...
Yeast   432 ------DLMLTACLAAS-----------RKKKGLDAIDKAFLKSL-IEYPKAKDALTKYKVLEFH 478

  Fly   499 PFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMEL 563
            ||:..:|...::.|:.   :...::.:||||..:|:...      ::..:.|::.|.:.|...||
Yeast   479 PFDPVSKKVTAVVESP---EGERIVCVKGAPLFVLKTVE------EDHPIPEDVHENYENKVAEL 534

  Fly   564 GGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAG 628
            ...|.|.||.      :.|...|             :...:|:|..:||||......:.:.|:.|
Yeast   535 ASRGFRALGV------ARKRGEG-------------HWEILGVMPCMDPPRDDTAQTINEARNLG 580

  Fly   629 IKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDV-- 691
            :::.|:|||....||...:.:|:   |.....  |:||.:......|         |:||.|.  
Yeast   581 LRIKMLTGDAVGIAKETCRQLGL---GTNIYN--AERLGLGGGGDMP---------GSELADFVE 631

  Fly   692 SSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAG 756
            ::|.            ||...||.|..:||..|..|.:||:|||||||:|:|||||.|:|:. ..
Yeast   632 NADG------------FAEVFPQHKYRVVEILQNRGYLVAMTGDGVNDAPSLKKADTGIAVE-GA 683

  Fly   757 SDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLG 821
            :|.::.|||::.|....::|:..::..|.||..:...:.|.:..:: .:..||...:..:...|.
Yeast   684 TDAARSAADIVFLAPGLSAIIDALKTSRQIFHRMYSYVVYRIALSL-HLEIFLGLWIAILNNSLD 747

  Fly   822 TVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFV 886
            ...|:.|.:..| |..:::||::|        |..|...|....||..|:. .:|::.|...:..
Yeast   748 INLIVFIAIFAD-VATLTIAYDNA--------PYAPEPVKWNLPRLWGMSI-ILGIVLAIGSWIT 802

  Fly   887 YFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVVVQ-WA 950
            ...:...||.:.:. ||        |:|.:                       .|:.|.:.: | 
Yeast   803 LTTMFLPNGGIIQN-FG--------AMNGV-----------------------MFLQISLTENW- 834

  Fly   951 DLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMYPLKLVWW 1006
              :|..||....|...:.:|.| .|.||...:.|            .|:.| ..||
Yeast   835 --LIFVTRAAGPFWSSIPSWQL-AGAVFAVDIIA------------TMFTL-FGWW 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 248/999 (25%)
Cation_ATPase_N 58..132 CDD:214842 15/92 (16%)
E1-E2_ATPase 152..383 CDD:278548 73/245 (30%)
Cation_ATPase 445..539 CDD:289987 18/93 (19%)
COG4087 <695..770 CDD:226572 30/74 (41%)
Cation_ATPase_C 817..1025 CDD:279079 39/191 (20%)
PMA2NP_015289.1 P-type_ATPase_H 116..903 CDD:319771 239/945 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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