DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atpalpha and PDR2

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_197752.1 Gene:PDR2 / 832428 AraportID:AT5G23630 Length:1179 Species:Arabidopsis thaliana


Alignment Length:1167 Identity:242/1167 - (20%)
Similarity:394/1167 - (33%) Gaps:370/1167 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 QELDIDFHKISPEELYQRFQTHPENGL----------------------SHAKAKENLERDGPNA 97
            :|:..||.|       |||....|.|.                      :.||.....|:.|.|.
plant   125 EEIFFDFRK-------QRFIYSKELGAFSKLPYPTKETFGHYLKCTGHGTEAKIATATEKWGRNV 182

  Fly    98 LTPPKQTPEWVKFCKN-------LFGGFAMLLW-------IGAILCFVAYSIQASTSEEPADDNL 148
            ...|:  |.:.|..|.       :|..|.:.||       ......|:.:..:::.::       
plant   183 FDYPQ--PTFQKLMKENCMEPFFVFQVFCVGLWCLDEFWYYSVFTLFMLFMFESTMAK------- 238

  Fly   149 YLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEV-- 211
                  |.:..:|.:.|...:|              |...|.|.|:.:.|...||:.||||.:  
plant   239 ------SRLKTLTDLRSVRVDS--------------QTVMVYRSGKWVKLLGTDLLPGDVVSIGR 283

  Fly   212 ---KFGDR---IPADIRIIEARNFKVDNSSLTGESEPQSR------------------------G 246
               :.|..   :|||:.::..... |:.:.|||||.||.:                        |
plant   284 PSTQTGGEDKTVPADMLLLVGSAI-VNEAILTGESTPQWKVPIVGQRSDEKLSIKRNKNHVLFGG 347

  Fly   247 AEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIH 311
            .:....:|.::     ||....:|....||:..|..|..|::  :.:.|.:.|...|....    
plant   348 TKILQHSPDKS-----FSLKTPDGGCLAVVLRTGFETSQGKL--MRTILFSTERVTANSWE---- 401

  Fly   312 LITGVAVFLGVTFFVIAFILGYHWLDAV--------IFLIG---IIVANVPEGLLATVTVCLTLT 365
              :|:.:...|.|.|||  .||..:..:        ..|:|   ||.:.:|..|...:::.:..:
plant   402 --SGLFILFLVVFAVIA--AGYVLVKGLEDPTRSKYKLLLGCSLIITSVIPPELPMELSIAVNTS 462

  Fly   366 AKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYD 430
            ...:..:.........:...|.....|.|||||||.:.|....:...:...||:|         |
plant   463 LLALVRRGIFCTEPFRIPFAGKVDLCCFDKTGTLTSDDMEFRGVGGLSNCEEAET---------D 518

  Fly   431 RTSPGFKALSRIATLCNRAEFKGGQDGVPILKKEVSGDASEAALLKCM-------ELAL-----G 483
            .:....:.|..:|: |:...|         ::.::.||..|.|.||.:       |.||     |
plant   519 MSKVPVRTLEILAS-CHALVF---------VENKLVGDPLEKAALKGIDWSYKADEKALPRRGNG 573

  Fly   484 DVMNIRKRN------KKIAEVPFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCSTIFIN 542
            :.:.|.:|.      |:::.:         |.|.|       .||..:|||||.|.||.      
plant   574 NSVQIMQRYHFASHLKRMSVI---------VRIQE-------EYLAFVKGAPETIQERL------ 616

  Fly   543 GKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLM 607
                   .::...:...|......|.|||......||..........:.|.:.   .:|.|.|..
plant   617 -------VDVPAQYIETYKRYTRQGSRVLALAYKRLPDMMVSEARDMDRDAVE---SDLTFAGFA 671

  Fly   608 SMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIIS----------EGNE---TV 659
            ....|.|......:.:.:::...::|:|||..:||..:|..|.|:|          .|||   ..
plant   672 VFNCPIRPDSAPVLLELKNSSHDLVMITGDQALTACHVAGQVHIVSNPVLILGRSGSGNEYKWVS 736

  Fly   660 EDIAQRLNIPVSEVNPREAKAAVVHGAELRD--VSSDQLDEILRYHTEI--------VFARTSPQ 714
            .|  ::..||.||   :|.:..    ||..|  :..|.: |:|:..:.:        ||||.:||
plant   737 PD--EKEIIPYSE---KEIETL----AETHDLCIGGDSI-EMLQATSAVLRVIPFVKVFARVAPQ 791

  Fly   715 QKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAM----------GIAGSDVSKQAADMILL 769
            ||.:|:...:.:|....:.|||.||..|||:|.:|||:          ..:..|.||.....:.|
plant   792 QKELILTTFKAVGRGTLMCGDGTNDVGALKQAHVGVALLNNKLPLSPSDSSKDDKSKSKKSKLPL 856

  Fly   770 DDNFASIV---TGVEEGRL-------------------IFDNLKK----------------SIAY 796
            :....:|.   .|..:|::                   |.|:|..                |:|.
plant   857 EPASKTITQNGEGSSKGKIPPQNRHLTAAELQRQKLKKIMDDLNNDEGDGRSAPLVKLGDASMAS 921

  Fly   797 TLTSNIPEISPFLAFIL-------------------CDIPLPLGTVTILC------IDLGTDMVP 836
            ..|:....::|....|.                   |     |.|..:|.      :.|| |:..
plant   922 PFTAKHASVAPVTDIIRQGRSTLVTTLQMFKILGLNC-----LATAYVLSVMYLDGVKLG-DVQA 980

  Fly   837 AIS--------LAYEHA---EADIMKRPPRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVI 890
            .||        |...||   :....:||....|:        :.:....||.......|.||.|.
plant   981 TISGVLTAAFFLFISHARPLQTLSAERPHPSVFS--------VYLFLSLIGQFAVHLTFLVYSVK 1037

  Fly   891 MAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIIC 955
            .||. .:|::.......:....||                |:.|.......::...|.:      
plant  1038 EAEK-HMPEECIEPDASFHPNLVN----------------TVSYMVSMMLQVATFAVNY------ 1079

  Fly   956 KTRRNSIFQQGMRN-----WALNFGLVFETVLAAFLSYCPGMEKGLRMYPL------KLVWW 1006
               ....|.|.:|.     :||..|..|.||:|:.|  ...:...|::.||      ||:.|
plant  1080 ---MGHPFNQSIRENKPFFYALIAGAGFFTVIASDL--FRDLNDSLKLVPLPQGLRDKLLIW 1136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 242/1167 (21%)
Cation_ATPase_N 58..132 CDD:214842 22/109 (20%)
E1-E2_ATPase 152..383 CDD:278548 54/273 (20%)
Cation_ATPase 445..539 CDD:289987 28/111 (25%)
COG4087 <695..770 CDD:226572 27/92 (29%)
Cation_ATPase_C 817..1025 CDD:279079 45/218 (21%)
PDR2NP_197752.1 P-ATPase-V 36..1136 CDD:273738 241/1165 (21%)
E1-E2_ATPase 237..476 CDD:278548 54/281 (19%)
Cation_ATPase <544..615 CDD:289987 24/86 (28%)
COG4087 <747..>832 CDD:226572 30/92 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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