DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp2b4

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001070935.1 Gene:atp2b4 / 768304 ZFINID:ZDB-GENE-061027-60 Length:316 Species:Danio rerio


Alignment Length:273 Identity:71/273 - (26%)
Similarity:122/273 - (44%) Gaps:57/273 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 QRFQTHPENGLSHAKAKENLERD----GPNALTPPKQTPEWVKFCKNLFGGFAMLLW-----IGA 126
            :|.:|.|..|||...|  ::|:.    |.|.: |||:...           |..|:|     :..
Zfish    57 RRLKTSPIEGLSGNPA--DIEKRHTSFGKNFI-PPKKPKT-----------FLQLVWEALQDVTL 107

  Fly   127 ILCFVA--YSIQASTSEEPADDNLYLG--------------------IVLSAVVIV-TGIFSYYQ 168
            |:..||  .|:..|....|..||...|                    |:.|.:::| ...|:.:.
Zfish   108 IILEVAAIISLALSFYHPPEGDNAACGEVGGVEDEGESQAGWIEGAAILFSVIIVVLVTAFNDWS 172

  Fly   169 ESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDN 233
            :.|..:.::|......:| ||||:|:.:.:...::|:||:.::|:||.:|||..:|:..:.|:|.
Zfish   173 KEKQFRGLQSRIEQEQKF-TVIRKGQVIQIPVAEIVVGDIAQIKYGDLLPADGILIQGNDLKIDE 236

  Fly   234 SSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTG 298
            |||||||:...:.        ||...:....|:.:||:.:.||.:.|.::..|.|..|....:..
Zfish   237 SSLTGESDQVRKS--------LEKDPMLLSGTHVMEGSGRMVVSAVGLNSQTGIIFTLLGAGEDE 293

  Fly   299 ETPIAK--EIHHF 309
            |..:.|  .:.||
Zfish   294 EKKVKKGENLKHF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 71/273 (26%)
Cation_ATPase_N 58..132 CDD:214842 17/69 (25%)
E1-E2_ATPase 152..383 CDD:278548 46/161 (29%)
Cation_ATPase 445..539 CDD:289987
COG4087 <695..770 CDD:226572
Cation_ATPase_C 817..1025 CDD:279079
atp2b4NP_001070935.1 Cation_ATPase_N 47..117 CDD:279080 19/73 (26%)
E1-E2_ATPase 153..>287 CDD:278548 41/142 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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