DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and Atp2b1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001346435.1 Gene:Atp2b1 / 67972 MGIID:104653 Length:1249 Species:Mus musculus


Alignment Length:1099 Identity:300/1099 - (27%)
Similarity:476/1099 - (43%) Gaps:295/1099 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 RFQTHPENGLSHAKAKENLERD----GPNALTPPKQTPEWVKFCKNLFGGFAMLLW-----IGAI 127
            :.:|.|..|||...|  :|||.    |.|.: |||:...           |..|:|     :..|
Mouse    62 KLKTSPNEGLSGNPA--DLERREAVFGKNFI-PPKKPKT-----------FLQLVWEALQDVTLI 112

  Fly   128 LCFVA--YSIQASTSEEPADDNLYLG--------------------IVLSAV-VIVTGIFSYYQE 169
            :..:|  .|:..|..:.|..||...|                    |:||.| |::...|:.:.:
Mouse   113 ILEIAAIVSLGLSFYQPPEGDNALCGEVSVGEEEGEGETGWIEGAAILLSVVCVVLVTAFNDWSK 177

  Fly   170 SKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDNS 234
            .|..:.::|......:| ||||.|:.:.:...|:.:||:.:||:||.:|||..:|:..:.|:|.|
Mouse   178 EKQFRGLQSRIEQEQKF-TVIRGGQVIQIPVADITVGDIAQVKYGDLLPADGILIQGNDLKIDES 241

  Fly   235 SLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGL-------- 291
            ||||||:...:.        |:...|....|:.:||:.:.||.:.|.::..|.|..|        
Mouse   242 SLTGESDHVKKS--------LDKDPLLLSGTHVMEGSGRMVVTAVGVNSQTGIIFTLLGAGGEEE 298

  Fly   292 ----------------------------------------ASGLDTGE----------------- 299
                                                    ..|.|..|                 
Mouse   299 EKKDEKKKEKKNKKQDGAIENRNKAKAQDGAAMEMQPLKSEEGGDGDEKDKKKANLPKKEKSVLQ 363

  Fly   300 ---TPIAKEIHHFIHLITGVAVFLGVTFFVI--AFILGYHWLD----------AVIFLIG--IIV 347
               |.:|.:|.....|::.:.|.:.|.:|||  .::....||.          ...|:||  ::|
Mouse   364 GKLTKLAVQIGKAGLLMSAITVIILVLYFVIDTFWVQKRPWLAECTPIYIQYFVKFFIIGVTVLV 428

  Fly   348 ANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFD 412
            ..|||||...||:.|..:.|:|...|.||::|:|.||:|:.:.||||||||||.|||||...:.:
Mouse   429 VAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTMNRMTVVQAYIN 493

  Fly   413 NQIIEADTTEDQSGVQYDRTSPGFKAL---------SRIATLCNRA------EFKGGQDGVPILK 462
            .:             .|.:. |..:|:         :.|:..|...      |.:||      |.
Mouse   494 EK-------------HYKKV-PEPEAIPPNILSYLVTGISVNCAYTSKILPPEKEGG------LP 538

  Fly   463 KEVSGDASEAALLKCMELALGDVMNIRKRNKKIA-EVP---------FNSTNKYQVSIHETEDTN 517
            :.| |:.:|.||       ||.::::::..:.:. |:|         |||..|   |:......:
Mouse   539 RHV-GNKTECAL-------LGFLLDLKRDYQDVRNEIPEEALYKVYTFNSVRK---SMSTVLKNS 592

  Fly   518 DPRYLLVMKGAPERILERCSTIF-INGKEKVL-----DEEMKEAFNNAYMELGGLGERVLGFCDF 576
            |..:.:..|||.|.||::|..|. .||:.||.     |:.:|........|  ||....|.|.||
Mouse   593 DGSFRIFSKGASEIILKKCFKILSANGEAKVFRPRDRDDIVKTVIEPMASE--GLRTICLAFRDF 655

  Fly   577 MLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 641
              |:.: |.....|.:|:   :..|..:.::.:.||.|..||:|:.||:.|||.|.|||||:..|
Mouse   656 --PAGE-PEPEWDNENDV---VTGLTCIAVVGIEDPVRPEVPEAIKKCQRAGITVRMVTGDNINT 714

  Fly   642 AKAIAKSVGIISEGNETV----EDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEI--- 699
            |:|||...||:..|.:.:    :|..:|:         |..|.         ::..:::|:|   
Mouse   715 ARAIATKCGILHPGEDFLCLEGKDFNRRI---------RNEKG---------EIEQERIDKIWPK 761

  Fly   700 LRYHTEIVFARTSPQQKLIIVEGC-------QRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGS 757
            ||     |.||:||..|..:|:|.       ||.  :|||||||.||.|||||||:|.||||||:
Mouse   762 LR-----VLARSSPTDKHTLVKGIIDSTVSEQRQ--VVAVTGDGTNDGPALKKADVGFAMGIAGT 819

  Fly   758 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAF----ILCDIPL 818
            ||:|:|:|:||.||||.|||..|..||.::|::.|.:.:.||.|:  ::..:||    |..|.||
Mouse   820 DVAKEASDIILTDDNFTSIVKAVMWGRNVYDSISKFLQFQLTVNV--VAVIVAFTGACITQDSPL 882

  Fly   819 PLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPP---RDPFNDKLVNSRLISMAYGQIGMIQA 880
            .  .|.:|.::|..|.:.:::||.|.....::.|.|   ..|...:.:...::..|:.|:     
Mouse   883 K--AVQMLWVNLIMDTLASLALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAFYQL----- 940

  Fly   881 AAGFFVYFVIMAENGFLPKKLFGIRK----------------MWDSKAVNDLTDSYGQEWTYRDR 929
                .|.|.::    |..:|.|.|..                ::::..:..|.:.......:.:|
Mouse   941 ----VVVFTLL----FAGEKFFDIDSGRNAPLHAPPSEHYTIVFNTFVLMQLFNEINARKIHGER 997

  Fly   930 KTLEYTCHTAFFISIV----VVQWADLIICK--TRRNSIFQQGMRNWALNFGLVFETVL 982
            ...|...:.|.|.:||    |||   :||.:  .:..|..:..:..|..:..|...|:|
Mouse   998 NVFEGIFNNAIFCTIVLGTFVVQ---IIIVQFGGKPFSCSELSIEQWLWSIFLGMGTLL 1053

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 300/1099 (27%)
Cation_ATPase_N 58..132 CDD:214842 18/68 (26%)
E1-E2_ATPase 152..383 CDD:278548 78/313 (25%)
Cation_ATPase 445..539 CDD:289987 27/109 (25%)
COG4087 <695..770 CDD:226572 44/84 (52%)
Cation_ATPase_C 817..1025 CDD:279079 37/191 (19%)
Atp2b1NP_001346435.1 ATPase-IIB_Ca 15..1064 CDD:273668 300/1099 (27%)
ATP_Ca_trans_C 1103..1178 CDD:372101
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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