DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atpalpha and atp1a1a.2

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_571762.1 Gene:atp1a1a.2 / 64613 ZFINID:ZDB-GENE-001212-2 Length:1023 Species:Danio rerio


Alignment Length:1029 Identity:726/1029 - (70%)
Similarity:864/1029 - (83%) Gaps:13/1029 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 DSYRVATVIATDDDNRTADGQYKSRRKMPAKVNKKENLDDLKQELDIDFHKISPEELYQRFQTHP 77
            |.||: |..:.|:..:|..|:            :|:::|:||:|:::|.||::.:||.:::.|..
Zfish     8 DDYRL-TPTSEDELKKTKKGK------------RKKDVDELKKEVELDDHKLTLDELSRKYGTGM 59

  Fly    78 ENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEE 142
            ..|||..:|||.||||||||||||..||:||||||.|||||..|||.||.|||:||.||.::.|:
Zfish    60 IKGLSSFRAKEILERDGPNALTPPPTTPQWVKFCKLLFGGFQTLLWFGAFLCFLAYGIQVASVED 124

  Fly   143 PADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGD 207
            .|.||||||:||:.||||.|.||:|||||||||||||:|:|||.|.|:|:|||..:.||::|:||
Zfish   125 AAHDNLYLGLVLAFVVIVNGWFSFYQESKSSKIMESFRNLVPQQALVVRDGEKKVINAEEVVVGD 189

  Fly   208 VVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTA 272
            ::||..|||||||:||:.|:..||||||||||||||||..||:|||||||||:||||||.|||||
Zfish   190 LIEVCGGDRIPADLRIVYAQGCKVDNSSLTGESEPQSRSPEFSHENPLETKNIAFFSTNCVEGTA 254

  Fly   273 KGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLD 337
            :|:.||.||.|:|||||.|||.|:.|:||||:||.||||:|:.|::||||||||::.||||.|::
Zfish   255 RGIAISTGDRTIMGRIASLASSLEGGQTPIAREIEHFIHIISAVSIFLGVTFFVLSLILGYAWIE 319

  Fly   338 AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQN 402
            ||:||||||||||||||.|||||||||||||||.|||||||||||||||||:|||||||||||||
Zfish   320 AVVFLIGIIVANVPEGLPATVTVCLTLTAKRMAKKNCLVKNLEAVETLGSTTTICSDKTGTLTQN 384

  Fly   403 RMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKKEVSG 467
            ||||||||||:||.||||||:|||..:||:||.:.||:|:|.|||||.|:..|..:|:|.:|.:|
Zfish   385 RMTVAHMWFDSQIHEADTTENQSGTSFDRSSPTWAALARVAGLCNRAVFRAEQSHLPVLNRETAG 449

  Fly   468 DASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERI 532
            ||||:|||||:||..|.|:.:|::.:||.|:|||||||||:|:|:...::..::|||||||||||
Zfish   450 DASESALLKCIELCCGSVIEMREKYRKICEIPFNSTNKYQLSVHKNPSSSGTKHLLVMKGAPERI 514

  Fly   533 LERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFP 597
            |:|||||.|||||:.:|:|.|::|.:||:|||||||||||||.:.||.|::|.||.|:.:|:|||
Zfish   515 LDRCSTILINGKEQPMDDENKDSFQSAYVELGGLGERVLGFCQYNLPDDQFPEGFAFDPEDVNFP 579

  Fly   598 IDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDI 662
            .:||.|:|||||||||||||||||||||||||||||||||||||||||||.||||||||||||||
Zfish   580 TENLCFLGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDI 644

  Fly   663 AQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMG 727
            |.|:||||.|||||||||.||||.||::::...||||||||||||||||||||||||||||||.|
Zfish   645 AARMNIPVGEVNPREAKACVVHGGELKNMNDSDLDEILRYHTEIVFARTSPQQKLIIVEGCQRQG 709

  Fly   728 AIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKK 792
            |||||||||||||||||||||||||||:|||||||||||||||||||||||||||||||||||||
Zfish   710 AIVAVTGDGVNDSPALKKADIGVAMGISGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKK 774

  Fly   793 SIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDP 857
            ||||||||.|||:||||.|::..|||||||||||.||||||::||||.|||:||.|||||.||:.
Zfish   775 SIAYTLTSKIPEMSPFLMFVVVGIPLPLGTVTILFIDLGTDLIPAISYAYENAENDIMKRQPRNA 839

  Fly   858 FNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQ 922
            ..|:|||.|||||||||||||||.||||.|..:||||||.|..|.|:|..|:.:::.||.|||||
Zfish   840 QKDRLVNERLISMAYGQIGMIQAVAGFFTYITVMAENGFRPSYLPGLRVGWEDRSIGDLEDSYGQ 904

  Fly   923 EWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFLS 987
            :|||..||.:|.||||||||||||||||||:|.|||||||.||||:|..|.|....|..||||||
Zfish   905 QWTYEGRKIIESTCHTAFFISIVVVQWADLLIVKTRRNSILQQGMKNKVLIFAFFEEGALAAFLS 969

  Fly   988 YCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041
            |||||:..:|||||:.:|||.|:|:||.||.|||.|::.|||||||::|:||||
Zfish   970 YCPGMDIAVRMYPLRPLWWFTALPYALIIFFYDEIRKYILRRNPGGFVEKETYY 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 717/995 (72%)
Cation_ATPase_N 58..132 CDD:214842 45/73 (62%)
E1-E2_ATPase 152..383 CDD:278548 169/230 (73%)
Cation_ATPase 445..539 CDD:289987 54/93 (58%)
COG4087 <695..770 CDD:226572 71/74 (96%)
Cation_ATPase_C 817..1025 CDD:279079 143/207 (69%)
atp1a1a.2NP_571762.1 ATPase-IIC_X-K 31..1023 CDD:273445 716/991 (72%)
Cation_ATPase_N 40..114 CDD:214842 45/73 (62%)
E1-E2_ATPase 134..365 CDD:278548 169/230 (73%)
Cation_ATPase 427..521 CDD:289987 54/93 (58%)
COG4087 <677..752 CDD:226572 71/74 (96%)
Cation_ATPase_C 799..1008 CDD:279079 143/208 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 296 1.000 Domainoid score I1444
eggNOG 1 0.900 - - E2759_KOG0203
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1592 1.000 Inparanoid score I79
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D388324at2759
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 1 1.000 - - otm24672
orthoMCL 1 0.900 - - OOG6_100215
Panther 1 1.100 - - O PTHR43294
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X416
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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