DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp1a1a.1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_571761.1 Gene:atp1a1a.1 / 64612 ZFINID:ZDB-GENE-001212-1 Length:1028 Species:Danio rerio


Alignment Length:1034 Identity:761/1034 - (73%)
Similarity:887/1034 - (85%) Gaps:9/1034 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GRADSYRVATVIATDDDNRTADGQYKSRRKMPAKVNKKENLDDLKQELDIDFHKISPEELYQRFQ 74
            ||.:......:.||.:     .|..||:.|  .|..|.:::|:||:|:|:|.||:|.:||.:::.
Zfish     2 GRGEGREQYELAATSE-----QGGKKSKSK--GKKEKDKDMDELKKEVDLDDHKLSLDELTRKYN 59

  Fly    75 THPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQAST 139
            |....|||..:|||.|.||||||||||..|||||||||.|||||:.||||||||||:||.|.|::
Zfish    60 TDLTRGLSGTRAKEILARDGPNALTPPPTTPEWVKFCKQLFGGFSTLLWIGAILCFLAYGILAAS 124

  Fly   140 SEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLV 204
            .||||:|||||||||||||::||.||||||:||||||:||||:|||.|.|||:|||..:.||::.
Zfish   125 EEEPANDNLYLGIVLSAVVMITGCFSYYQEAKSSKIMDSFKNLVPQQALVIRDGEKKNINAEEVA 189

  Fly   205 LGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVE 269
            :||:||||.|||||||:|||.|...||||||||||||||:|..:|:::|||||:|:||||||.||
Zfish   190 VGDLVEVKGGDRIPADLRIISAHGCKVDNSSLTGESEPQTRTPDFSNDNPLETRNIAFFSTNCVE 254

  Fly   270 GTAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYH 334
            |||:|:||:.||.|||||||.|||||:.|.|||:.||.||||:||||||||||:||:::.||||.
Zfish   255 GTARGIVINTGDRTVMGRIATLASGLEVGRTPISIEIEHFIHIITGVAVFLGVSFFILSLILGYS 319

  Fly   335 WLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTL 399
            ||:|||||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
Zfish   320 WLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMAKKNCLVKNLEAVETLGSTSTICSDKTGTL 384

  Fly   400 TQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKKE 464
            ||||||||||||||||.||||||:|||..:||:|..:.||:|:|.|||||.|...|:.:||||::
Zfish   385 TQNRMTVAHMWFDNQIHEADTTENQSGTSFDRSSATWAALARVAGLCNRAVFLAEQENIPILKRD 449

  Fly   465 VSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSIHETEDTN--DPRYLLVMKG 527
            |:|||||:|||||:||..|.|..:|::..||:|:|||||||||:|||:..::|  :.::||||||
Zfish   450 VAGDASESALLKCIELCCGSVKEMREKYNKISEIPFNSTNKYQLSIHQNPNSNNTESKHLLVMKG 514

  Fly   528 APERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTD 592
            ||||||:|||:|.|.|||:.||:|||:||.|||:|||||||||||||.|.||.:::|..|:|:|:
Zfish   515 APERILDRCSSILIQGKEQPLDDEMKDAFQNAYLELGGLGERVLGFCHFNLPDEQFPEDFQFDTE 579

  Fly   593 DINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNE 657
            ::|||.:||.|:|||||||||||||||||.|||||||||||||||||||||||||.|||||||||
Zfish   580 EVNFPTENLCFIGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 644

  Fly   658 TVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEG 722
            ||||||.|||||::|||||:|||.|:||.:|:|:|.:|||::|::||||||||||||||||||||
Zfish   645 TVEDIAARLNIPINEVNPRDAKACVIHGGDLKDLSPEQLDDVLKHHTEIVFARTSPQQKLIIVEG 709

  Fly   723 CQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIF 787
            |||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Zfish   710 CQRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIF 774

  Fly   788 DNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKR 852
            ||||||||||||||||||:|||.||:.:||||||||||||||||||||||||||||.||:|||||
Zfish   775 DNLKKSIAYTLTSNIPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKR 839

  Fly   853 PPRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLT 917
            .||:|..|||||.||||:||||||||||.||||.||||:|||||||..|.|||..||.|.||||.
Zfish   840 QPRNPKTDKLVNERLISIAYGQIGMIQALAGFFTYFVILAENGFLPSSLLGIRVFWDDKYVNDLE 904

  Fly   918 DSYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVL 982
            |||||:|||..||.:|:|||||||.|||:|||||||||||||||:|||||:|..|.|||..||.|
Zfish   905 DSYGQQWTYEQRKIVEFTCHTAFFTSIVIVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETAL 969

  Fly   983 AAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041
            ||||||||||:..|||||||..|||.|.|::|.||||||.|:..:||:||||:|:||||
Zfish   970 AAFLSYCPGMDVALRMYPLKPNWWFCAFPYSLLIFIYDEIRKLIIRRSPGGWVERETYY 1028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 750/997 (75%)
Cation_ATPase_N 58..132 CDD:214842 49/73 (67%)
E1-E2_ATPase 152..383 CDD:278548 175/230 (76%)
Cation_ATPase 445..539 CDD:289987 58/95 (61%)
COG4087 <695..770 CDD:226572 69/74 (93%)
Cation_ATPase_C 817..1025 CDD:279079 161/207 (78%)
atp1a1a.1NP_571761.1 ATPase-IIC_X-K 38..1028 CDD:273445 748/989 (76%)
Cation_ATPase_N 43..117 CDD:214842 49/73 (67%)
E1-E2_ATPase 137..368 CDD:278548 175/230 (76%)
Cation_ATPase 430..526 CDD:289987 58/95 (61%)
COG4087 611..757 CDD:226572 127/145 (88%)
Cation_ATPase_C 804..1013 CDD:279079 161/208 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 340 1.000 Domainoid score I1059
eggNOG 1 0.900 - - E2759_KOG0203
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1592 1.000 Inparanoid score I79
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D50082at33208
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 1 1.000 - - otm24672
orthoMCL 1 0.900 - - OOG6_100215
Panther 1 1.100 - - O PTHR43294
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3604
SonicParanoid 1 1.000 - - X416
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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