DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp2c1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:XP_003200287.2 Gene:atp2c1 / 559574 ZFINID:ZDB-GENE-060503-615 Length:922 Species:Danio rerio


Alignment Length:936 Identity:278/936 - (29%)
Similarity:447/936 - (47%) Gaps:160/936 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KSRRKMPAKVNKKENLDDLKQELDIDFHKISPEELYQRFQTHPENGLSHAKAKENLERDGPNALT 99
            |....:|...:||.:      ||.::       |:....|...:.||:..:.:......|.|...
Zfish    17 KDETMVPVLTSKKAS------ELPVN-------EVACALQADLQFGLNREEVERRRTYHGWNEFD 68

  Fly   100 PPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEEPADDNLYLGIVLSAVVIVTGIF 164
            ..:..|.|.|:.........:||...|::..:......:.|           |.::.:::||  .
Zfish    69 ISEDEPLWKKYLSQFKDPLILLLLSSAVISVLMRQFDDAVS-----------ITVAIIIVVT--V 120

  Fly   165 SYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNF 229
            ::.||.:|.|.:|....:||.....||||....|.|.:||.||.|.:..|:|:|||:|:.|:.:.
Zfish   121 AFVQEYRSEKSLEELGKLVPPECHCIREGHLEHLLARELVPGDTVCLSVGERVPADLRLFESTDL 185

  Fly   230 KVDNSSLTGESEPQSRGA----EFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAG 290
            .||.||||||:.|.::.:    ..|:.:.....|:||..|....|.|||:||..|:.:..|.:..
Zfish   186 AVDESSLTGETTPCTKTSAPQPAATNGDIASRSNIAFMGTLVRCGKAKGIVIGTGEDSEFGEVFK 250

  Fly   291 LASGLDTGETP-------IAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIVA 348
            :....:..:||       :.|::..:...|.||.:|:|       ::.|.:.||.....:.:.||
Zfish   251 MMQAEEAPKTPLQKSMDLLGKQLSLYSLGIIGVIMFVG-------WLQGKYILDMFTIGVSLAVA 308

  Fly   349 NVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMW-FD 412
            .:||||...|||.|.|...||..|..:||.|..||||...:.||||||||||:|.|||.|:: .|
Zfish   309 AIPEGLPIVVTVTLALGVMRMVKKRAIVKKLPIVETLSCCNVICSDKTGTLTKNEMTVTHLFTSD 373

  Fly   413 NQIIEADTTEDQSGVQYDR--------------TSPGFKALSRIATLCNRAEFKGGQDGVPILKK 463
            .|..|.      :|:.|:.              ::.....:..:..:||.|         .|...
Zfish   374 GQHAEV------TGIGYNNSGEILMDGEVVHGISNTSISKIVEVGCVCNDA---------MIRHN 423

  Fly   464 EVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQV--SIHETEDTNDPRYLLVMK 526
            .:.|..:|.||: .:.:.:| :..::....::.|:||.|..|:..  .:|.|:  .|...|..:|
Zfish   424 TLMGRPTEGALI-ALAMKMG-LEGLQHEFVRLEEIPFTSEQKWMAVRVVHRTQ--RDKPGLFYVK 484

  Fly   527 GAPERILERCSTIFINGKEKVLDEEMKEAF--NNAYMELGGLGERVLGFCDFMLPSDKYPNGFKF 589
            ||.|:::..|::....|....|:.:.::.:  ..:||..|||  |||.|..              
Zfish   485 GAYEQVIRFCTSYNSKGVTMPLNNQQRDFYQQQKSYMGSGGL--RVLAFAS-------------- 533

  Fly   590 NTDDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISE 654
                 ...:.:|.|:||:.:||||||.|.:|||...|:|:.|.|||||...||.|||..:|:.::
Zfish   534 -----GSEMGSLTFLGLVGIIDPPRAGVKEAVATLISSGVAVKMVTGDSEETAVAIASRLGLYTK 593

  Fly   655 GNETVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLII 719
            |::.:.                        |.|:..:....|.:|:  |..:||.|.||:.||.|
Zfish   594 GSQCLS------------------------GDEVDQMDIQHLSQIV--HRVVVFYRASPRHKLKI 632

  Fly   720 VEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGR 784
            |:..|.:||:||:|||||||:.|||.||||||||..|:||.|:||||||:||:|.:|::.:|||:
Zfish   633 VKSLQNIGAVVAMTGDGVNDAVALKAADIGVAMGQTGTDVCKEAADMILVDDDFQTILSAIEEGK 697

  Fly   785 LIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADI 849
            .|::|:|..:.:.|:::|..::......|.:.|.||..:.||.|::..|..||.||..|..:.|:
Zfish   698 GIYNNIKNFVRFQLSTSIAALTLISLATLLNFPTPLNAMQILWINIIMDGPPAQSLGVEPVDWDV 762

  Fly   850 MKRPPRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVN 914
            :::|||: ..|.::...||      :.::.:|      |:|:....|:         .|     .
Zfish   763 IRKPPRN-VRDSIITRSLI------VKILVSA------FIIVCGTLFV---------FW-----R 800

  Fly   915 DLTDSYGQEWTYRDRKTLEYTCHTAF 940
            :|.|:   |.|.|| .|:.:||...|
Zfish   801 ELRDN---EITPRD-TTMTFTCFVFF 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 276/926 (30%)
Cation_ATPase_N 58..132 CDD:214842 12/73 (16%)
E1-E2_ATPase 152..383 CDD:278548 78/241 (32%)
Cation_ATPase 445..539 CDD:289987 23/95 (24%)
COG4087 <695..770 CDD:226572 45/74 (61%)
Cation_ATPase_C 817..1025 CDD:279079 34/124 (27%)
atp2c1XP_003200287.2 ATPase-IIA2_Ca 27..906 CDD:130585 276/926 (30%)
Cation_ATPase_N 30..98 CDD:279080 14/80 (18%)
E1-E2_ATPase 110..343 CDD:278548 78/241 (32%)
Cation_ATPase 414..497 CDD:289987 23/95 (24%)
HAD_like 555..665 CDD:119389 53/135 (39%)
Cation_ATPase_C 730..902 CDD:279079 34/124 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.920

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