DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp2b3b

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:XP_021325490.1 Gene:atp2b3b / 558525 ZFINID:ZDB-GENE-080409-2 Length:1297 Species:Danio rerio


Alignment Length:1025 Identity:296/1025 - (28%)
Similarity:466/1025 - (45%) Gaps:270/1025 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 NLDDLKQELDI----DFHKISP-----EELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQT 104
            :||:|:..:::    ...||..     |.|.||.::...:|||          |.|..|...:||
Zfish    37 SLDELRNLMELRGAEALQKIQESFTDVEGLCQRLKSSTTDGLS----------DNPTDLEKRRQT 91

  Fly   105 PEWVKFCKNLF-----GGFAMLLW------------IGAILCFVAYSIQASTSEEPADDNLYLG- 151
                 |.:|..     ..|..|:|            :.||:     |:..|..:.|.:|:...| 
Zfish    92 -----FGQNFIPPKKPKTFLQLVWEALQDVTLIILELAAII-----SLALSFYQPPGEDSEVCGK 146

  Fly   152 --------------------IVLS--AVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGE 194
                                |:||  .||:||. |:.:.:.|..:.::|...:..:|| |:|.|.
Zfish   147 GAGGAEDEGEAEAGWIEGAAILLSVICVVLVTA-FNDWSKEKQFRGLQSRIELEQRFA-VVRNGN 209

  Fly   195 KLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKN 259
            .:.:...::|:||:.:||:||.:|||..:::..:.|:|.|||||||:...:..|   ::|     
Zfish   210 VIQIPVAEMVVGDMAQVKYGDLLPADGVLVQGNDLKIDESSLTGESDHVRKSVE---KDP----- 266

  Fly   260 LAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTGE------------------------- 299
            :....|:.:||:.:.:|.:.|.::..|.|..|. |...||                         
Zfish   267 MLLSGTHVMEGSGRMLVTAVGVNSQSGIIFTLL-GAGEGEEEKKEKKGKQPEAAVETNQNKAKKQ 330

  Fly   300 -----------------------------------------TPIAKEIHHFIHLITGVAVFLGVT 323
                                                     |.:|.:|.....:::.:.|.:.|.
Zfish   331 DGAVAMEMQPLKSAEGGEVEEREKKKANVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVL 395

  Fly   324 FFVI-AFILG-YHWLD----------AVIFLIG--IIVANVPEGLLATVTVCLTLTAKRMASKNC 374
            :||| .|::| ..||.          ...|:||  ::|..|||||...||:.|..:.|:|...|.
Zfish   396 YFVIDTFVVGNMTWLPECTPIYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNN 460

  Fly   375 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKAL 439
            ||::|:|.||:|:.:.||||||||||.|||||...:.::|...  ...|.|.:..:.......|:
Zfish   461 LVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYINDQHFR--EIPDPSQISPNTLEMIVNAI 523

  Fly   440 SRIATLCNR---AEFKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRKR--NKKIAEV- 498
            |......::   .:.:||      |.|:| |:.:|..||..:.....|...:|::  .:|:.:| 
Zfish   524 SINCAYTSKIMPPDVEGG------LPKQV-GNKTECGLLGFLLDLKRDYAPVREQIPEEKLYKVY 581

  Fly   499 PFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCSTIF-INGKEKVL-----DEEMKEAFN 557
            .|||..|...::.:..|.:   :.|..|||.|.:|::||:|. .||:.:..     ||.:|:...
Zfish   582 TFNSVRKSMSTVVQMPDGS---FRLYSKGASEIVLKKCSSILGTNGEARNFRPRDRDEMVKKVIE 643

  Fly   558 NAYMELGGLGERVLGFCDFMLPSDKYP---NGFKFNTDDINFPIDNLRFVGLMSMIDPPRAAVPD 619
            .  |...||....:|:.|  ||.|..|   |..:..||        |..:.::.:.||.|..|||
Zfish   644 P--MACEGLRTICIGYRD--LPGDPEPEWENEAEIVTD--------LTCIAVVGIEDPVRPEVPD 696

  Fly   620 AVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETV----EDIAQRLNIPVSEVNPREAKA 680
            |:.||:.|||.|.|||||:..||:|||...|||..|::.:    :|..:|:         |..|.
Zfish   697 AIRKCQRAGITVRMVTGDNINTARAIASKCGIIQPGDDFLCLEGKDFNRRI---------RNEKG 752

  Fly   681 AVVHGAELRDVSSDQLDEI---LRYHTEIVFARTSPQQKLIIVEGC-------QRMGAIVAVTGD 735
                     ::..:::|:|   ||     |.||:||..|..:|:|.       ||.  :||||||
Zfish   753 ---------EIEQERIDKIWPKLR-----VLARSSPTDKHTLVKGIIDSTVLEQRQ--VVAVTGD 801

  Fly   736 GVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTS 800
            |.||.|||||||:|.||||||:||:|:|:|:||.||||:|||..|..||.::|::.|.:.:.||.
Zfish   802 GTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV 866

  Fly   801 NIPEISPFLAF----ILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPP------R 855
            |:  ::..:||    |..|.||.  .|.:|.::|..|...:::||.|         ||      |
Zfish   867 NV--VAVIVAFTGACITQDSPLK--AVQMLWVNLIMDTFASLALATE---------PPTEALLLR 918

  Fly   856 DPFNDKLVNSRLISMAYGQIGMIQAAAGFFVY-FVIMAENGFLPKKLFGI 904
            .|:..   |:.|||:.     |::...|..|| .||:....|:.:|:|.|
Zfish   919 KPYGR---NNPLISLT-----MMKNILGHGVYQLVIIFTLLFVGEKIFNI 960

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 296/1025 (29%)
Cation_ATPase_N 58..132 CDD:214842 21/99 (21%)
E1-E2_ATPase 152..383 CDD:278548 78/312 (25%)
Cation_ATPase 445..539 CDD:289987 26/99 (26%)
COG4087 <695..770 CDD:226572 44/84 (52%)
Cation_ATPase_C 817..1025 CDD:279079 27/95 (28%)
atp2b3bXP_021325490.1 E1-E2_ATPase 27..1068 CDD:332568 296/1025 (29%)
ATP_Ca_trans_C 1107..1191 CDD:315156
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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