DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp2b2

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001116710.1 Gene:atp2b2 / 557430 ZFINID:ZDB-GENE-061016-1 Length:1253 Species:Danio rerio


Alignment Length:1156 Identity:315/1156 - (27%)
Similarity:482/1156 - (41%) Gaps:332/1156 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 EELYQRFQTHPENGLSHA-----KAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLW--- 123
            |.|.||.:|.|..||:..     |.||...|:    |.|||:...           |..|:|   
Zfish    51 EGLCQRLKTSPTEGLAGLATDLDKRKEVFGRN----LIPPKKPKT-----------FLQLVWEAL 100

  Fly   124 --IGAILCFVA--YSIQASTSEEPADDN--------------------------LYLGIVLSAVV 158
              :..|:..:|  .|:..|..:.|.:.|                          :.|.:|  .||
Zfish   101 QDVTLIILEIAALISLGLSFYQPPGEGNTDACGDAKAGAEDEGESEAGWIEGAAILLSVV--CVV 163

  Fly   159 IVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRI 223
            :||. |:.:.:.|..:.::|......:| .|:|.|:.:.|...|:::||:.::|:||.:|||..:
Zfish   164 LVTA-FNDWSKEKQFRGLQSRIEQEQKF-QVVRGGQVIQLPVADILVGDIAQIKYGDLLPADGVL 226

  Fly   224 IEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRI 288
            |:..:.|:|.|||||||:...:.|:   ::|     :....|:.:||:.:.||.:.|.::..|.|
Zfish   227 IQGNDLKIDESSLTGESDHVRKAAD---KDP-----MLLSGTHVMEGSGRMVVTAVGVNSQSGII 283

  Fly   289 AGL-------------------------------------------------------------- 291
            ..|                                                              
Zfish   284 FTLLGAGGEEEEKKEKKGQALEDGHPLPDCSHPSSHPIATIATDGAASANTPANTSLVNGKMQDG 348

  Fly   292 -------------------------ASGLDTGE--------------------TPIAKEIHHFIH 311
                                     |.|.:|.|                    |.:|.:|.....
Zfish   349 NMENNQTKVKKQDGAAAMEMQPLKSAEGGETEEKEKKKTSVSKKEKSVLQGKLTKLAVQIGKAGL 413

  Fly   312 LITGVAVFLGVTFFVI-AFILGYH-WLD----------AVIFLIG--IIVANVPEGLLATVTVCL 362
            :::.:.|.:.|.:|.| .|:.... ||.          ...|:||  ::|..|||||...||:.|
Zfish   414 VMSAITVIILVLYFAIDTFVRQKRPWLTECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISL 478

  Fly   363 TLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGV 427
            ..:.|:|...|.||::|:|.||:|:.:.||||||||||.||||..      |:..||       |
Zfish   479 AYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAV------QVYVAD-------V 530

  Fly   428 QY----DRTSPGFKAL----------SRIATLCNRAEFKGGQDGVPILKKEVSGDASEAALLKCM 478
            .|    :.||...|.|          |...|....|:.:||      |.|:| |:.:|...|..:
Zfish   531 HYKTIPEPTSLPSKTLDILVNAISLNSAYTTKILPADKEGG------LPKQV-GNKTECGFLGLV 588

  Fly   479 ELALGDVMNIRKR--NKKIAEV-PFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCSTIF 540
            .....|...||.:  .:|:.:| .|||..|...::.:..|.:   :.:..|||.|.||::||.|.
Zfish   589 LDVKRDYQTIRNQIPEEKLYKVYTFNSVRKSMSTVIKLPDGS---FRMYSKGASEIILKKCSRIL 650

  Fly   541 IN-GKEKVL-----DEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFPID 599
            .. |:.:|.     ||.:|:....  |...||....:|:.||  |.|..|     |.:|.|..:.
Zfish   651 SEVGEPRVFRPRDRDEMVKKVIEP--MACDGLRTICVGYRDF--PKDPEP-----NWEDENNILT 706

  Fly   600 NLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQ 664
            :|..:.::.:.||.|..||||:.||:.|||.|.|||||:..||:|||...|||..|    ||.  
Zfish   707 DLTAICVVGIEDPVRPEVPDAIQKCQRAGITVRMVTGDNINTARAIAIKCGIIHPG----EDF-- 765

  Fly   665 RLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEI---LRYHTEIVFARTSPQQKLIIVEGC--- 723
             |.|...|.|.|...       |..:|..:::|::   ||     |.||:||..|..:|:|.   
Zfish   766 -LCIDGKEFNRRIRN-------EKGEVEQERIDKVWPKLR-----VLARSSPTDKHTLVKGIIDS 817

  Fly   724 ----QRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGR 784
                ||.  :|||||||.||.|||||||:|.||||||:||:|:|:|:||.||||:|||..|..||
Zfish   818 TLVDQRQ--VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFSSIVKAVMWGR 880

  Fly   785 LIFDNLKKSIAYTLTSNIPEISPFLAF----ILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHA 845
            .::|::.|.:.:.||.|:  ::..:||    |..|.||.  .|.:|.::|..|...:::||.|..
Zfish   881 NVYDSISKFLQFQLTVNV--VAVIVAFTGACITQDSPLK--AVQMLWVNLIMDTFASLALATEPP 941

  Fly   846 EADIMKRPPRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRK---- 906
            ...::.|.|... |..|::|.:.....|. |:.|....|.:.||        .:::|.|..    
Zfish   942 TESLLMRKPYGR-NKPLISSTMTKNILGH-GVYQLVIIFSLLFV--------GEQIFDIDSGRNA 996

  Fly   907 ------------MWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRR 959
                        ::::..:..|.:.......:.:|...:.......|.||||..:|..|:     
Zfish   997 PLHSPPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCSIVVGTFAIQIV----- 1056

  Fly   960 NSIFQQG----------MRNW---------ALNFGLVFETVLAAFLSYCPG 991
              |.|.|          :..|         .|.:|.|..|:..:.|.:..|
Zfish  1057 --IVQFGGKPFSCSPLDLEKWMWCVFLGMGELVWGQVISTIPNSKLRFLRG 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 315/1156 (27%)
Cation_ATPase_N 58..132 CDD:214842 20/74 (27%)
E1-E2_ATPase 152..383 CDD:278548 76/351 (22%)
Cation_ATPase 445..539 CDD:289987 27/96 (28%)
COG4087 <695..770 CDD:226572 43/84 (51%)
Cation_ATPase_C 817..1025 CDD:279079 41/210 (20%)
atp2b2NP_001116710.1 ATPase-IIB_Ca 9..1096 CDD:273668 313/1145 (27%)
Cation_ATPase_N 48..115 CDD:279080 21/78 (27%)
E1-E2_ATPase 191..499 CDD:278548 67/315 (21%)
Cation_ATPase 560..649 CDD:289987 28/98 (29%)
HAD 657..840 CDD:289480 77/212 (36%)
Cation_ATPase_C 914..1092 CDD:279079 37/196 (19%)
ATP_Ca_trans_C 1137..1184 CDD:289209
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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