DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and Atp2a3

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_058025.2 Gene:Atp2a3 / 53313 MGIID:1194503 Length:1038 Species:Mus musculus


Alignment Length:1064 Identity:321/1064 - (30%)
Similarity:500/1064 - (46%) Gaps:173/1064 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HKISPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGA 126
            |.:|..::.:||....|.|||..:..:..||.|||.|...:....|....:........:|.:.|
Mouse     5 HLLSAADVLRRFSVTAEGGLSLEQVTDARERYGPNELPTEEGKSLWELVVEQFEDLLVRILLLAA 69

  Fly   127 ILCFVAYSIQ-----ASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQF 186
            ::.||....:     .:...||        :|:..:::...|...:||..:...:|:.|...|:.
Mouse    70 LVSFVLAWFEEGEETTTAFVEP--------LVIMLILVANAIVGVWQERNAESAIEALKEYEPEM 126

  Fly   187 ATVIREGEK--LTLRAEDLVLGDVVEVKFGDRIPADIRIIEARN--FKVDNSSLTGESEPQSRGA 247
            ..|||...|  ..:||.|:|.||:|||..||::|||:|:||.::  .:||.|.|||||...::  
Mouse   127 GKVIRSDRKGVQRIRARDIVPGDIVEVAVGDKVPADLRLIEIKSTTLRVDQSILTGESVSVTK-- 189

  Fly   248 EFTHENPL--------ETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTGETPIAK 304
               |.:.:        :.||:.|..||...|.|.||.::.|..|.:|:|....:.::...||:.:
Mouse   190 ---HTDAIPDPRAVNQDKKNMLFSGTNIASGKALGVAVATGLQTELGKIRSQMAAVEPERTPLQR 251

  Fly   305 EIHHFIHLITGVAVFLGVTFFVIAF------ILGYHWLDAVIF----LIGIIVANVPEGLLATVT 359
            ::..|...::.....:.|..:||..      ..|..||...::    .:.:.||.:||||.|.:|
Mouse   252 KLDEFGRQLSHAISVICVAVWVINIGHFADPAHGGSWLRGAVYYFKIAVALAVAAIPEGLPAVIT 316

  Fly   360 VCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEAD----- 419
            .||.|..:|||.||.:|::|.:|||||.||.||||||||||.|:|:|..|:.   :.||:     
Mouse   317 TCLALGTRRMARKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCRMFV---VAEAEAGTCR 378

  Fly   420 --------TTEDQSGV-----------QYDRTSPGFKALSRIATLCNRA-----EFKGGQDGVPI 460
                    ||....|.           |:|    |...|:.|..|||.:     |.||..:.|  
Mouse   379 LHEFTISGTTYTPEGEVRQGEQPVRCGQFD----GLVELATICALCNDSALDYNEAKGVYEKV-- 437

  Fly   461 LKKEVSGDASEAALLKCMELALGDVMN---------------------IRKRNKKIAEVPFNSTN 504
                  |:|:|.||     ..|.:.||                     |::..:|...:.| |.:
Mouse   438 ------GEATETAL-----TCLVEKMNVFDTDLKGLSRVERAGACNSVIKQLMRKEFTLEF-SRD 490

  Fly   505 KYQVSIHETEDTNDPRY---LLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGL 566
            :..:|::.|....||:.   .:.:|||||.::||||::.:..:...|....:|.. .|.:...|.
Mouse   491 RKSMSVYCTPTRADPKVQGSKMFVKGAPESVIERCSSVRVGSRTAPLSTTSREHI-LAKIRDWGS 554

  Fly   567 GERVLGFCDFMLPSDKYPNGFKFNTDD----INFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSA 627
            |...|. |..:...|..|.....:.||    :.:..| |.|||.:.|:||||..|...:.:|..|
Mouse   555 GSDTLR-CLALATRDTPPRKEDMHLDDCSRFVQYETD-LTFVGCVGMLDPPRPEVAACITRCSRA 617

  Fly   628 GIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVS 692
            ||:|:|:|||:..||.||.:.:||..:    .||:.              .||..  |.|..|:|
Mouse   618 GIRVVMITGDNKGTAVAICRRLGIFGD----TEDVL--------------GKAYT--GREFDDLS 662

  Fly   693 SDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGS 757
            .:|..:..|  |...|||..|..|..|||..|....|.|:|||||||:||||||:||:||| :|:
Mouse   663 PEQQRQACR--TARCFARVEPAHKSRIVENLQSFNEITAMTGDGVNDAPALKKAEIGIAMG-SGT 724

  Fly   758 DVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGT 822
            .|:|.||:|:|.||||||||..|||||.|::|:|:.|.|.::||:.|:.......:..:|..|..
Mouse   725 AVAKSAAEMVLSDDNFASIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGLPEALIP 789

  Fly   823 VTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVNSRLISMAYGQIGM------IQAA 881
            |.:|.::|.||.:||.:|.:...:.|||::|||:| .:.|::..|. ..|..||:      :.||
Mouse   790 VQLLWVNLVTDGLPATALGFNPPDLDIMEKPPRNP-REALISGWLF-FRYLAIGVYVGLATVAAA 852

  Fly   882 AGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVV 946
            ..:|:|.....:..|     :.:|........|.|       :...|.|..|....|...:|::|
Mouse   853 TWWFLYDTEGPQVTF-----YQLRNFLKCSEDNPL-------FAGIDCKVFESRFPTTMALSVLV 905

  Fly   947 -VQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFLSY----CPGMEKGLRMYPLKLVWW 1006
             ::..:.:...:...|:.:  |..| ||..|:...|::..|.:    .|.:....::.||....|
Mouse   906 TIEMCNALNSVSENQSLLR--MPPW-LNPWLLGAVVMSMALHFLILLVPPLPLIFQVTPLSGRQW 967

  Fly  1007 FPAIPFALAIFIYDETRRFYLRRN 1030
            ...:..:|.:.:.||..: ||.||
Mouse   968 GVVLQMSLPVILLDEALK-YLSRN 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 321/1064 (30%)
Cation_ATPase_N 58..132 CDD:214842 18/69 (26%)
E1-E2_ATPase 152..383 CDD:278548 77/252 (31%)
Cation_ATPase 445..539 CDD:289987 32/122 (26%)
COG4087 <695..770 CDD:226572 39/74 (53%)
Cation_ATPase_C 817..1025 CDD:279079 51/218 (23%)
Atp2a3NP_058025.2 Cation_ATPase_N 4..72 CDD:279080 17/66 (26%)
ATPase-IIA1_Ca 53..989 CDD:273452 304/1013 (30%)
E1-E2_ATPase 92..340 CDD:278548 77/252 (31%)
Interaction with phospholamban 1. /evidence=ECO:0000250|UniProtKB:P04191 370..400 5/29 (17%)
Cation_ATPase 419..528 CDD:289987 32/122 (26%)
HAD <604..712 CDD:289480 48/129 (37%)
Cation_ATPase_C 784..987 CDD:279079 51/220 (23%)
Interaction with phospholamban 2. /evidence=ECO:0000250|UniProtKB:P04191 788..808 7/19 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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