DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp1a1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_989407.1 Gene:atp1a1 / 395044 XenbaseID:XB-GENE-484831 Length:1023 Species:Xenopus tropicalis


Alignment Length:1035 Identity:769/1035 - (74%)
Similarity:892/1035 - (86%) Gaps:14/1035 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 YEHGRADSYRVATVIATDDDNRTADGQYKSRRKMPAKVNKKENLDDLKQELDIDFHKISPEELYQ 71
            |..|| |.|..|   ||.:     .|..|.:.|     .|.:::|:||:||.::.||:|.:||::
 Frog     3 YGAGR-DKYEPA---ATSE-----QGGKKKKGK-----GKDKDMDELKKELTMEDHKLSLDELHR 53

  Fly    72 RFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQ 136
            :|.|..:.|||.|:|.|.|.||||||||||..||||||||:.|||||:|||||||||||:||.|.
 Frog    54 KFGTDMQRGLSTARAAEILARDGPNALTPPPTTPEWVKFCRQLFGGFSMLLWIGAILCFLAYGIT 118

  Fly   137 ASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAE 201
            |:|.|||.:||||||:|||||||:||.||||||:|||||||||||||||.|.|||.||||::.||
 Frog   119 AATEEEPTNDNLYLGVVLSAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIRNGEKLSINAE 183

  Fly   202 DLVLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTN 266
            |:||||:||||.|||||||:|||.|...||||||||||||||:|..:||:||||||:|:||||||
 Frog   184 DVVLGDLVEVKGGDRIPADVRIISAHGCKVDNSSLTGESEPQTRSPDFTNENPLETRNIAFFSTN 248

  Fly   267 AVEGTAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFIL 331
            .|||||:|||::.||.|||||||.|||||:.|.||||.||.||||:||||||||||:||:::.||
 Frog   249 CVEGTARGVVVNTGDRTVMGRIATLASGLEGGRTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL 313

  Fly   332 GYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKT 396
            .|.||:|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||
 Frog   314 QYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKT 378

  Fly   397 GTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPIL 461
            |||||||||||||||||||.||||||:|||..:|::||.:.||||:|.|||||.|:.||:..|||
 Frog   379 GTLTQNRMTVAHMWFDNQIHEADTTENQSGASFDKSSPTWTALSRVAGLCNRAVFQAGQENTPIL 443

  Fly   462 KKEVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSIHETEDTNDPRYLLVMK 526
            |::|:|||||:|||||:||..|.|.::|::|.|:||:|||||||||:|:|:..:.::.||:||||
 Frog   444 KRDVAGDASESALLKCIELCCGSVRDMREKNPKVAEIPFNSTNKYQLSVHKNANPSESRYILVMK 508

  Fly   527 GAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNT 591
            |||||||:|||||.:.|||:.||||:|:||.|||:|||||||||||||...|..|::|:||:|:|
 Frog   509 GAPERILDRCSTIVLQGKEQPLDEELKDAFQNAYLELGGLGERVLGFCHLALSDDQFPDGFQFDT 573

  Fly   592 DDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGN 656
            :::|||.:||.||||:||||||||||||||.|||||||||||||||||||||||||.||||||||
 Frog   574 EEVNFPTENLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGN 638

  Fly   657 ETVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVE 721
            |||||||.||||||::||||:|||.|:||::|:|::.:|:|:||::|||||||||||||||||||
 Frog   639 ETVEDIAARLNIPVNQVNPRDAKACVIHGSDLKDMAQEQIDDILKHHTEIVFARTSPQQKLIIVE 703

  Fly   722 GCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 786
            ||||.|||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||
 Frog   704 GCQRQGAIVAVTGDGVNDSPALKKADIGIAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLI 768

  Fly   787 FDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMK 851
            |||||||||||||||||||:|||.||:.:||||||||||||||||||||||||||||.||:||||
 Frog   769 FDNLKKSIAYTLTSNIPEITPFLIFIVANIPLPLGTVTILCIDLGTDMVPAISLAYEQAESDIMK 833

  Fly   852 RPPRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDL 916
            |.||:|..|||||.|||||||||||||||..|||.||||:|||||||..|.|||..||.:..||:
 Frog   834 RQPRNPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPWTLLGIRVNWDDRWNNDV 898

  Fly   917 TDSYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETV 981
            .|||||:|||..||.:|:|||||||:|||||||||||||||||||:|||||:|..|.|||..||.
 Frog   899 EDSYGQQWTYEQRKIVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETA 963

  Fly   982 LAAFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041
            |||||||||||:..|||||||..|||.|.|::|.||||||.|:..:||:||||:|:||||
 Frog   964 LAAFLSYCPGMDVALRMYPLKPTWWFCAFPYSLLIFIYDEVRKLIIRRSPGGWVEKETYY 1023

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 756/995 (76%)
Cation_ATPase_N 58..132 CDD:214842 48/73 (66%)
E1-E2_ATPase 152..383 CDD:278548 183/230 (80%)
Cation_ATPase 445..539 CDD:289987 59/93 (63%)
COG4087 <695..770 CDD:226572 68/74 (92%)
Cation_ATPase_C 817..1025 CDD:279079 159/207 (77%)
atp1a1NP_989407.1 ATPase-IIC_X-K 32..1023 CDD:273445 755/990 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 335 1.000 Domainoid score I1133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1570 1.000 Inparanoid score I90
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D50082at33208
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 1 1.000 - - otm48370
Panther 1 1.100 - - O PTHR43294
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X416
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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