DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp2a1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001007030.1 Gene:atp2a1 / 260440 ZFINID:ZDB-GENE-020905-1 Length:994 Species:Danio rerio


Alignment Length:1057 Identity:299/1057 - (28%)
Similarity:483/1057 - (45%) Gaps:162/1057 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 HKISPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGA 126
            |.....|....|......||:..:.|:|..:.|.|.|...:....|....:........:|.:.|
Zfish     5 HTKETPECLAYFGVSESTGLTPEQVKKNQAKYGFNELPAEEGKSIWELVVEQFEDLLVRILLLAA 69

  Fly   127 ILCFVAYSIQ-----ASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQF 186
            .:.||....:     .:...||        .|:..::|...:...:||..:...:|:.|...|:.
Zfish    70 CISFVLAWFEEGEETVTAFVEP--------FVILLILIANAVVGVWQERNAESAIEALKEYEPEM 126

  Fly   187 ATVIREGEKLT--LRAEDLVLGDVVEVKFGDRIPADIRI--IEARNFKVDNSSLTG--------- 238
            ..|.|...|..  ::|.::|.||:|||..||::||||||  |.:...:||.|.|||         
Zfish   127 GKVYRSDRKSVQRIKAREIVPGDIVEVSVGDKVPADIRITAIRSTTLRVDQSILTGESVSVIKHT 191

  Fly   239 ESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTGETPIA 303
            ||.|..|...      .:.||:.|..||...|.|.|||::.|..|.:|:|....:..:..:||:.
Zfish   192 ESVPDPRAVN------QDKKNMLFSGTNIAAGKAIGVVVATGVSTEIGKIRDQMAATEQEKTPLQ 250

  Fly   304 KEIHHFIHLITGVAVFLGVTFFVIAF------ILGYHWLDAVIF----LIGIIVANVPEGLLATV 358
            :::..|...::.|...:.|..::|..      :.|..|:...::    .:.:.||.:||||.|.:
Zfish   251 QKLDEFGEQLSKVISLICVAVWLINIGHFNDPVHGGSWIRGAVYYFKIAVALAVAAIPEGLPAVI 315

  Fly   359 TVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTED 423
            |.||.|..:|||.||.:|::|.:|||||.||.||||||||||.|:|.|..|:...::.....|.|
Zfish   316 TTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQMCVTKMFVIEKVEGESVTLD 380

  Fly   424 QSGVQYDRTSP-----------------GFKALSRIATLCNRA-----EFKGGQDGVPILKKEVS 466
            |..:...:.:|                 |...|:.|..|||.:     |.||..:.|        
Zfish   381 QYDISGSKYTPEGEVTKNGLPVKCGQFDGLVELATICALCNDSSLDYNESKGIYEKV-------- 437

  Fly   467 GDASEAA---LLKCMELALGDVMNIRKRN---------KKIAEVPFN---STNKYQVSIH--ETE 514
            |:|:|.|   |::.|.:...||..:.|..         |::.:..|.   |.::..:|::  ..:
Zfish   438 GEATETALCCLVEKMNVFNTDVRGLSKVERANTCCAVIKQLMKKDFTLEFSRDRKSMSVYCSPAK 502

  Fly   515 DTNDP-RYLLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFML 578
            .:..| ...:.:|||||.:::||:.:.:......|...:|:.. .|.::..|.|...|. |..:.
Zfish   503 ASKAPVGNKMFVKGAPEGVIDRCAYVRVGTTRVPLTGPVKDKI-MAVIKEWGTGRDTLR-CLALA 565

  Fly   579 PSDKYPNGFKFNTDD----INFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHP 639
            ..|......:.|.:|    ..:..| |.|||.:.|:||||..|..::..||:|||:|||:|||:.
Zfish   566 TRDNPLRPEEMNLEDSTKFAEYETD-LTFVGCVGMLDPPRKEVVGSIELCRAAGIRVIMITGDNK 629

  Fly   640 ITAKAIAKSVGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEILRYHT 704
            .||.||.:.:||.|:.    ||:..|                ...|.|..|:...|..|.:|  .
Zfish   630 GTAVAICRRIGIFSDD----EDVTGR----------------AFTGREFDDLPLPQQREAVR--K 672

  Fly   705 EIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILL 769
            ...:||..|..|..|||..|....|.|:|||||||:||||||:||:||| :|:.|:|.|::|:|.
Zfish   673 ACCYARVEPSHKSKIVEFLQGFDEITAMTGDGVNDAPALKKAEIGIAMG-SGTAVAKSASEMVLA 736

  Fly   770 DDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDM 834
            ||||:|||..|||||.|::|:|:.|.|.::||:.|:..........:|..|..|.:|.::|.||.
Zfish   737 DDNFSSIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGLPEALIPVQLLWVNLVTDG 801

  Fly   835 VPAISLAYEHAEADIMKRPPRDPFNDKLVNS----RLISMAYGQIG--MIQAAAGFFVYFVIMAE 893
            :||.:|.:...:.|||.:.||.| .:.|::.    |.:::. |.:|  .:.||..:|:|    .:
Zfish   802 LPATALGFNPPDLDIMGKAPRSP-KEPLISGWLFFRYLAIG-GYVGAATVAAAGWWFLY----CD 860

  Fly   894 NGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTAFFISIVV-VQWADLIICKT 957
            .|.: ...:.:.......|.|:  |..|.|.     :..|........:|::| ::..:.:...:
Zfish   861 EGPM-VSFYQLSHFMQCTADNE--DFAGIEC-----EVFEAAPPMTMALSVLVTIEMCNALNSLS 917

  Fly   958 RRNSIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGLRMY--PLKLVW---------WFPAIP 1011
            ...|:.:  |..|: |..|.....|:..|.:       :.:|  ||.:::         |...:.
Zfish   918 ENQSLLR--MPPWS-NLWLAGAMTLSMSLHF-------MIIYVDPLPMIFKLTHLNFDQWIVVLK 972

  Fly  1012 FALAIFIYDETRRFYLR 1028
            .:..:.:.||..:|..|
Zfish   973 LSFPVILIDEALKFVAR 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 299/1057 (28%)
Cation_ATPase_N 58..132 CDD:214842 14/69 (20%)
E1-E2_ATPase 152..383 CDD:278548 76/253 (30%)
Cation_ATPase 445..539 CDD:289987 28/116 (24%)
COG4087 <695..770 CDD:226572 37/74 (50%)
Cation_ATPase_C 817..1025 CDD:279079 46/225 (20%)
atp2a1NP_001007030.1 Cation_ATPase_N 4..72 CDD:279080 13/66 (20%)
ATPase-IIA1_Ca 53..989 CDD:273452 287/1007 (29%)
E1-E2_ATPase 93..340 CDD:278548 76/252 (30%)
Cation_ATPase 419..528 CDD:289987 28/116 (24%)
HAD <604..712 CDD:289480 48/129 (37%)
Cation_ATPase_C 784..987 CDD:279079 46/226 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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