DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and Atp2c1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001240760.1 Gene:Atp2c1 / 235574 MGIID:1889008 Length:952 Species:Mus musculus


Alignment Length:976 Identity:285/976 - (29%)
Similarity:458/976 - (46%) Gaps:162/976 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    63 KISPEELYQRFQTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAI 127
            :::..|:....|...:|||:.::........|.|.....:..|.|.|:.........|||...|:
Mouse    62 ELAVSEVAGLLQADLQNGLNKSEVSHRRAFHGWNEFDISEDEPLWKKYISQFKNPLIMLLLASAV 126

  Fly   128 LCFVAYSIQASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIRE 192
            :..:......:.|           |.::.|::||  .::.||.:|.|.:|....:||.....:||
Mouse   127 ISILMRQFDDAVS-----------ITVAIVIVVT--VAFVQEYRSEKSLEELSKLVPPECHCVRE 178

  Fly   193 GEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENP--- 254
            |:.....|.|||.||.|.:..|||:|||:|:.||.:..||.||||||:.|.|:   .|...|   
Mouse   179 GKLEHTLARDLVPGDTVCLSVGDRVPADLRLFEAVDLSVDESSLTGETAPCSK---VTAPQPAAN 240

  Fly   255 ---LETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTGETP-------IAKEIHHF 309
               ....|:||..|....|.|||:||..|:::..|.:..:....:..:||       :.|::..:
Mouse   241 GDLASRSNIAFMGTLVRCGKAKGIVIGTGENSEFGEVFKMMQAEEAPKTPLQKSMDLLGKQLSFY 305

  Fly   310 IHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNC 374
            ...|.|:.:.:|       ::||...|:.....:.:.||.:||||...|||.|.|...||..|..
Mouse   306 SFGIIGIIMLVG-------WLLGKDILEMFTISVSLAVAAIPEGLPIVVTVTLALGVMRMVKKRA 363

  Fly   375 LVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSP----- 434
            :||.|..|||||..:.||||||||||:|.|||.|: ..:..:.|:.|    ||.|::...     
Mouse   364 IVKKLPIVETLGCCNVICSDKTGTLTKNEMTVTHI-LTSDGLHAEVT----GVGYNQFGEVIVDG 423

  Fly   435 ----GF--KALSRI---ATLCNRAEFKGGQDGVPILKKEVSGDASEAALLK-CMELALGDVMN-- 487
                ||  .|:|||   ..:||        |.| |....:.|..:|.||:. .|::.|..:..  
Mouse   424 DVVHGFYNPAVSRIVEAGCVCN--------DAV-IRNNTLMGKPTEGALIALAMKMGLDGLQQDY 479

  Fly   488 IRKRNKKIAEVPFNSTNKYQV--SIHETEDTNDPRYLLVMKGAPERILERCSTIFINGKEKVLDE 550
            |||     ||.||:|..|:..  .:|.|:  .|...:..||||.|::::.|:|....|:...|.:
Mouse   480 IRK-----AEYPFSSEQKWMAVKCVHRTQ--QDRPEICFMKGAYEQVIKYCTTYNSKGQTLALTQ 537

  Fly   551 EMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSMIDPPRA 615
            :.::.:......:|..|.|||....                   ...:..|.|:||:.:|||||.
Mouse   538 QQRDLYQQEKARMGSAGLRVLALAS-------------------GPELGQLTFLGLVGIIDPPRT 583

  Fly   616 AVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPVSEVNPREAKA 680
            .|.:||....::|:.:.|:|||...||.|||..:|:.|:.:::|.                    
Mouse   584 GVKEAVTTLIASGVSIKMITGDSQETAIAIASRLGLYSKTSQSVS-------------------- 628

  Fly   681 AVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVNDSPALKK 745
                |.|:..:....|.:|:  ....||.|.||:.|:.|::..|:.||:||:|||||||:.|||.
Mouse   629 ----GEEVDTMEVQHLSQIV--PKVAVFYRASPRHKMKIIKSLQKNGAVVAMTGDGVNDAVALKA 687

  Fly   746 ADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLA 810
            ||||||||..|:||.|:||||||:||:|.:|::.:|||:.|::|:|..:.:.|:::|..::....
Mouse   688 ADIGVAMGQTGTDVCKEAADMILVDDDFQTIMSAIEEGKGIYNNIKNFVRFQLSTSIAALTLISL 752

  Fly   811 FILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVNSRLISMAYGQI 875
            ..|.:.|.||..:.||.|::..|..||.||..|..:.|::::|||: :.|.::...||....  :
Mouse   753 ATLMNFPNPLNAMQILWINIIMDGPPAQSLGVEPVDKDVIRKPPRN-WKDSILTKNLILKIL--V 814

  Fly   876 GMIQAAAG-FFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKTLEYTCHTA 939
            ..|....| .||::..:.:|...|                            || .|:.:||...
Mouse   815 SSIIIVCGTLFVFWRELRDNVITP----------------------------RD-TTMTFTCFVF 850

  Fly   940 FFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFL-SYCPGMEKGLRMYPLKL 1003
            |       ...:.:..:::..|:|:.|:.:..:....|..:::...| .|.|.::|..:...|.:
Mouse   851 F-------DMFNALSSRSQTKSVFEIGLCSNKMFCYAVLGSIMGQLLVIYFPPLQKVFQTESLSI 908

  Fly  1004 V 1004
            :
Mouse   909 L 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 285/976 (29%)
Cation_ATPase_N 58..132 CDD:214842 14/68 (21%)
E1-E2_ATPase 152..383 CDD:278548 80/243 (33%)
Cation_ATPase 445..539 CDD:289987 29/98 (30%)
COG4087 <695..770 CDD:226572 42/74 (57%)
Cation_ATPase_C 817..1025 CDD:279079 40/190 (21%)
Atp2c1NP_001240760.1 ATPase-IIA2_Ca 57..936 CDD:130585 285/976 (29%)
Cation_ATPase_N 60..128 CDD:279080 14/65 (22%)
E1-E2_ATPase 152..372 CDD:278548 76/229 (33%)
Cation_ATPase 443..526 CDD:289987 29/98 (30%)
COG4087 589..712 CDD:226572 58/148 (39%)
Cation_ATPase_C 759..931 CDD:279079 40/190 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53587
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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