DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and CG45063

DIOPT Version :10

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001286728.1 Gene:CG45063 / 19835490 FlyBaseID:FBgn0266433 Length:252 Species:Drosophila melanogaster


Alignment Length:246 Identity:71/246 - (28%)
Similarity:118/246 - (47%) Gaps:33/246 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 KSRRKMPAKVNKKENLDDLKQELDIDFHKISP-------EELYQRFQTHPENGLSHAKAKENLER 92
            :||||   |..::|:|...:.||.:::  .||       .||..|.:.:...||:...|...|.|
  Fly    17 RSRRK---KKEERESLQQTENELWLEY--FSPYLHIWPFHELCARLEANVSQGLTSEAAGRKLAR 76

  Fly    93 DGPNALTPPK--QTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEEPADDN-------L 148
            :|.|.|..|.  :...|: |.|:.|....:::.:.:|..|..|.:.|:.:    .||       |
  Fly    77 NGKNVLPLPTKLELRPWI-FLKSCFSILGIIILLSSIASFAMYYLFATKT----PDNGKVDPEFL 136

  Fly   149 YLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKF 213
            ..||:|.....:.|:....|......::.:|..::|.:.||||:|||..:|.:|||.||.:.:|:
  Fly   137 VAGIILLVTFFLAGLTVQMQGDDDEDMLIAFDELMPMYCTVIRDGEKEVIRTQDLVPGDTLPIKY 201

  Fly   214 GDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFS 264
            |.|:|||:|.......:::|.:|||.|:|.       |..||..:....:|
  Fly   202 GQRLPADMRFFSTTGLELNNVALTGHSKPM-------HITPLANEGRQRYS 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 66/236 (28%)
CG45063NP_001286728.1 ATPase-IIC_X-K 21..>230 CDD:273445 63/218 (29%)

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