DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and CG45062

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001286726.1 Gene:CG45062 / 19835139 FlyBaseID:FBgn0266432 Length:794 Species:Drosophila melanogaster


Alignment Length:837 Identity:259/837 - (30%)
Similarity:431/837 - (51%) Gaps:105/837 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 TKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLA--SGLDTGETPIAKEIHHFIHLITGVAVF 319
            :.|:....|:|:.|....|.::||.:|.:|.:..|.  ....:......|:|.:::.|:.     
  Fly    11 SSNMGLACTHAISGIGFAVALACGRNTEVGSMTDLCFKERSRSRSQKHQKQISYYMLLVA----- 70

  Fly   320 LGVTFFVIAFILGYHWLDAVIFLI-----GIIVANVPEGLLATVTVC---------LTLTAKRMA 370
                  ::.|||        :||.     |.||..|...||..:|..         |..|.|.|.
  Fly    71 ------IVCFIL--------LFLTTGFEHGHIVYEVNLSLLIGLTPVYLPFILYWGLRRTRKEMG 121

  Fly   371 SKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPG 435
            .|.|.|:||.|..|||.::.|.||..||:|:.||.|:.::.|..::..|      .:.....||.
  Fly   122 RKQCHVRNLRATCTLGLSTVIVSDLVGTMTKRRMRVSEIFVDMGLLSVD------NLDVSAQSPR 180

  Fly   436 FKALSRIATLCNRAEFKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPF 500
            |..|.|.:.|||.|....|..|||.::|::.|:..:.||||...:.|..:..:|..::|:|...:
  Fly   181 FIELIRASVLCNDAVICPGNIGVPKMQKDMYGNILDIALLKFGLMILPSIDLLRHDHEKVANKHY 245

  Fly   501 NSTNKYQVSIHETEDTNDP-RYLLVMKGAPERILERCSTIFINGKEKVLDEEMKEAFNNAYMELG 564
            ||.:|.||::|.|.|.:.. :.:|:|||..|.::.||||..|..:|..|||:::|.         
  Fly   246 NSEDKVQVTVHRTRDADGHLKLVLLMKGHCEVVIRRCSTFAIRDEELPLDEQLQEI--------- 301

  Fly   565 GLGERVLGFCDFMLPSDKYPNGFKFN--TDDINF---------------------PID--NLRFV 604
                 :|...|.:|.:.::...|.:.  :|::.|                     .:|  :|||:
  Fly   302 -----ILSLADGLLEAGRHVRAFAYKELSDELEFRRFSQVNTGLEGGEYKYRDYLAVDTYSLRFL 361

  Fly   605 GLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIP 669
            |:::..:|||:.:|.||.:||:||||:|:||...|..|||:|..|||:...::|.:.:..:...|
  Fly   362 GMIATYNPPRSTIPKAVDRCRAAGIKLIVVTQRKPKMAKALAVDVGILPAPSDTFQAVNLKRMPP 426

  Fly   670 VSEVNPREAKAAVVHGAELRDVSSD----QLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIV 730
            .:|         ||..::..|....    .:::::....::|.|.||..|...|.:.|:|:||:|
  Fly   427 TAE---------VVDMSQYADEKPQHQRRHIEQLILNQQDLVCAATSTDQLHWIADACRRLGAVV 482

  Fly   731 AVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA-ADMILLDDNFASIVTGVEEGRLIFDNLKKSI 794
            :|.|..::|:||::.:.:|||.  .||.|..:| ||:||||.:||::|:.|.:.||:|:||||::
  Fly   483 SVIGGTLHDTPAMRSSHVGVAK--YGSAVMCEASADLILLDTSFATLVSVVGDSRLLFENLKKAL 545

  Fly   795 AYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFN 859
            ||.|.:||..|..:|.|.|..|||.:..:..|.:....::|||::|.||..|.::|.:.|: .::
  Fly   546 AYCLATNICNILVYLFFFLLGIPLYIHIMDELILAFLVNLVPALTLIYEPPEENLMLQMPK-VYD 609

  Fly   860 DKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEW 924
            |.|:||||..:::..:|.|:|||.|..|||.||:.||||:.|..:...|....::|:|||:||||
  Fly   610 DFLLNSRLFFVSHILVGTIEAAAVFMTYFVFMADKGFLPRTLVALNIAWHDDMLDDITDSFGQEW 674

  Fly   925 TYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFL--- 986
            :...|:.||....:...:|:.|:|..:|::.||.|.::...|.|||.|:..::....|...|   
  Fly   675 SSEARRQLECQVSSLCLMSLAVMQCTNLVLTKTGRANLLAHGFRNWLLSLAVLLLICLCVQLCIM 739

  Fly   987 --SYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041
              :.|..:|....::....:  ....||.:.:...:.|||:::|..|..|||..|.|
  Fly   740 DSTVCLRLEGTNELHFGHFL--LTNCPFMILLVFIETTRRYFIRLFPDSWLELATMY 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 258/835 (31%)
Cation_ATPase_N 58..132 CDD:214842
E1-E2_ATPase 152..383 CDD:278548 35/141 (25%)
Cation_ATPase 445..539 CDD:289987 34/94 (36%)
COG4087 <695..770 CDD:226572 27/75 (36%)
Cation_ATPase_C 817..1025 CDD:279079 66/212 (31%)
CG45062NP_001286726.1 E1-E2_ATPase <13..132 CDD:278548 34/137 (25%)
Cation_ATPase 190..284 CDD:289987 33/93 (35%)
Cation_ATPase_C 582..777 CDD:295563 62/197 (31%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 67 1.000 Domainoid score I532
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 282 1.000 Inparanoid score I96
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D388324at2759
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.970

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