DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and mca-3

DIOPT Version :10

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001380077.1 Gene:mca-3 / 177089 WormBaseID:WBGene00003153 Length:1234 Species:Caenorhabditis elegans


Alignment Length:1101 Identity:300/1101 - (27%)
Similarity:483/1101 - (43%) Gaps:280/1101 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 DLKQELDIDFHKISPEELYQRFQTHPENGLSHAKAKENLERD----GPNALT--PPKQTPEWVKF 110
            :.|::::.|:.  ....|.:|.:|.|.|||.:  .:|.|||.    |.|.:.  |||        
 Worm    21 EAKEKIETDYG--GTTGLCERLKTDPNNGLPN--NEEELERRRNVFGANEIPPHPPK-------- 73

  Fly   111 CKNLFGGFAMLLW------------IGAILCFVAYSIQASTSEEPA--DDNLY-------LGIVL 154
            |      |..|:|            :.||:. :|.|......|:.|  ||:.:       :.|::
 Worm    74 C------FLQLVWEALQDVTLVILLVSAIVS-LALSFYRPPGEDTAGSDDSEHDAGWIEGVAILI 131

  Fly   155 S--AVVIVTGIFSYYQESKSSKIMESFKNMVPQFAT-----VIREGEKLTLRAEDLVLGDVVEVK 212
            |  .||:||.:..|.:|       ..|:.:..:..|     |:|.|:.:.:...:||:||:.::|
 Worm   132 SVIVVVLVTALNDYTKE-------RQFRGLQAKIETEHRFFVLRGGQSVQVVVNELVVGDIAQIK 189

  Fly   213 FGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVI 277
            :||.||:|..||::.:.|:|.|||||||:...:..|  |:      .:....|:.:||:.|.:|.
 Worm   190 YGDLIPSDGIIIQSNDLKMDESSLTGESDQIRKSPE--HD------PIILSGTHVMEGSGKMLVT 246

  Fly   278 SCGDHTVMGRIAGL----------------------ASGLDTGE--------------------- 299
            :.|.::..|.|..|                      |||.:.|.                     
 Worm   247 AVGVNSQTGIIMTLLGAAKTVAEEERKTAKREGGDGASGAEEGTAQALLDSKGDEAMANGKAVAA 311

  Fly   300 ----------------TPIAKEIHHFIHLITGVAVFLGVTFFVI--------AFILG--YHWLDA 338
                            |.:|.:|.:....:.|..|.:.:..|.|        :|.|.  .|:::.
 Worm   312 AESDGKKERSVLQAKLTRLAIQIGYAGSFVAGCTVLILIIRFCISRYAIDGKSFSLADFQHFINF 376

  Fly   339 VIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNR 403
            :|..:.::|..|||||...||:.|..:.|:|...|.||::|:|.||:|:.:.||||||||||.||
 Worm   377 LIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMLDNNLVRHLDACETMGNATAICSDKTGTLTTNR 441

  Fly   404 MTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKKEVS-- 466
            |||... |.|.:...||.:.:|   .|:.:      :::...|...........:|  .|::.  
 Worm   442 MTVVQS-FVNDVHYKDTPKIES---LDQNT------AKLMMDCISINSSYSSQVIP--PKQLGEQ 494

  Fly   467 ----GDASEAALLKCMELALG-DVMNIRKRN--KKIAEV-PFNSTNKYQVSIHETEDTNDPRYLL 523
                |:.:|..:|..: |||| ....||.|:  :.|.:| .|||..|   |:....:..|..|.:
 Worm   495 ATQLGNKTECGMLGFV-LALGKSYQEIRDRHPEETIPKVYTFNSVRK---SMSTVINLPDGGYRV 555

  Fly   524 VMKGAPERILERCSTIFINGKEKVLDE-EMKEAFNNAY-----MELGGLGERVLGFCDFMLPSDK 582
            ..|||.|.:.:||.  :..||...|.: ..|:|.|...     |...||....:.:.|: :||.|
 Worm   556 FSKGASEIVTKRCK--YFLGKNGTLTKFSSKDAENLVRDVIEPMASDGLRTICVAYKDY-VPSSK 617

  Fly   583 --YPNGFKFNT----DDINFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPIT 641
              ..|...:::    ::....:.::..:.::.:.||.|..||.|:.:|:.|||.|.|||||:..|
 Worm   618 KTADNQIAYSSEPDWENEEMIVGDMTAIAVLGIQDPVRPEVPAAITRCQEAGITVRMVTGDNINT 682

  Fly   642 AKAIAKSVGIISEGNETVEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEI---LRYH 703
            |::||.:.||:..|.:.:....:..|..:.:.|              .:||.::||.|   ||  
 Worm   683 ARSIATACGILKPGEDFIALEGKEFNARIRDEN--------------GEVSQEKLDLIWPKLR-- 731

  Fly   704 TEIVFARTSPQQKLIIVEGC--QRM---GAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQA 763
               |.||..|..|.::|:|.  .|:   ..:|||||||.||.|||||||:|.||||||:||:|:|
 Worm   732 ---VLARAQPSDKYVLVKGIIDSRVTDSREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEA 793

  Fly   764 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEISPFLAFI-LCDI-PLPLGTVTIL 826
            :|:||.||||.|||..|..||.::|::.|.:.:.||.|:  ::..:||: .|.| ..||..|.:|
 Worm   794 SDIILTDDNFTSIVKAVMWGRNVYDSIAKFLQFQLTVNV--VAVVVAFVGACAIQDTPLKAVQML 856

  Fly   827 CIDLGTDMVPAISLAYEHAEADIMKRPP---RDPFNDKLVNSRLISMA------------YGQIG 876
            .::|..|.:.:::||.|....:::||.|   ..|...:.:...::..|            ||:: 
 Worm   857 WVNLIMDTLASLALATEMPTEELLKRKPYGRTSPLISRTMCKNILGHAVYQLVILFTLIFYGEV- 920

  Fly   877 MIQAAAG---------------FFVYFVIMA-ENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWT 925
            .....:|               .|..||:|. .|....:|:.|.|.::.....|           
 Worm   921 CFNIPSGRWAPLHSPPSKHFTIVFNTFVMMTLFNEINARKIHGERNIFKGLFSN----------- 974

  Fly   926 YRDRKTLEYTCHTAFFISIVVV-----QWADLIICKTRRNSIFQQGMRN-----WALNFGL 976
                 .:.|....|..||.||:     :|             |.....|     |.|.||:
 Worm   975 -----PIYYVIWIATMISQVVIIQFGGRW-------------FSTSALNTTEWLWCLAFGV 1017

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 300/1101 (27%)
mca-3NP_001380077.1 P-type_ATPase_Ca_PMCA-like 55..896 CDD:319776 264/910 (29%)
Cation_ATPase_C 849..1026 CDD:376368 39/199 (20%)
ATP_Ca_trans_C 1066..1108 CDD:463575
Blue background indicates that the domain is not in the aligned region.

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