DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and catp-1

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001122528.1 Gene:catp-1 / 173307 WormBaseID:WBGene00013672 Length:1121 Species:Caenorhabditis elegans


Alignment Length:1144 Identity:365/1144 - (31%)
Similarity:579/1144 - (50%) Gaps:164/1144 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HGRADSYRVA--TVIATDDDNRTADGQYKSRRKMPAKVNKKENLDDLKQELDIDFHKISPE---E 68
            :|..|.:..|  ::.::..||.....:.|.:|....:.:....|.|:.:...:: |.:|.:   :
 Worm    11 NGVVDIHESAGTSICSSSADNTVTKEKAKRKRAEKEETDHGMTLHDIIKTSFVE-HTLSVDQIRD 74

  Fly    69 LYQRFQTHPE-----NGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFG-GFAMLLWIGAI 127
            ||......|:     :||...:||:.|:..|.|.:..| |.|...:|..:.|. .|.:||...|:
 Worm    75 LYPDSYVFPQCAERSDGLHSDEAKKRLKDGGLNQIDRP-QEPSLSRFFLSQFHFKFWILLLGAAV 138

  Fly   128 LCFVAYSI-QASTSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIR 191
            |..:.|.| .|....||.  |||..|:|.|||:..|:.||:|::|:.|:::..::|:|..:.|||
 Worm   139 LSVMTYFIHMARGFNEPL--NLYCAIILIAVVVFMGMLSYWQQAKAKKVLQENRDMMPVMSYVIR 201

  Fly   192 EGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHEN--P 254
            :.|:..::|:::|:||:|.::.|.:||||:||::|....:::..:||...||...::....|  .
 Worm   202 DCEEQEIKADEIVVGDLVYLRAGYKIPADMRILQANCLMIESHDVTGHRMPQEYKSDPVQANVSV 266

  Fly   255 LETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVF 319
            .:..|:||..:...||...|:||..|..||:|.:|.....:......:..|:.:|...|:.||:.
 Worm   267 FDACNVAFMGSYCTEGEGIGIVIRTGKFTVLGALANQHHHIPPPSGRLQTELQNFSTFISIVAIS 331

  Fly   320 LG-VTFFVIAFILGY-HWLDAVIFLIG---IIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNL 379
            :. |.||:..|:..: :.||.  |::|   |||||||:||.|||...|.:.|:|||.||.|:|.|
 Worm   332 MATVVFFIGCFVARFENVLDH--FIVGFVVIIVANVPQGLPATVMSQLRIIARRMAQKNILIKKL 394

  Fly   380 EAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALS---- 440
            |.::.||:.:.||:||:||||.|:|.|..:||:::::        :|...|...|..:.:.    
 Worm   395 ELIDELGAATVICADKSGTLTMNQMVVTDLWFNSRLV--------TGQAVDLKHPHLRVMKASMK 451

  Fly   441 -------------RIATLCNRAEFK---------------------------------------- 452
                         .:.::||..:|:                                        
 Worm   452 CPERLEEPLPDILTVMSVCNNGQFEHVRRGMRRVSTMRAMQKSASEAMLSAHMKKKFTIVDTRTG 516

  Fly   453 --GGQDG---------------------VPILKKEVSGDASEAALLKCMELALGDVMNIRKRNKK 494
              .||.|                     |...|.::.|..|:.||:|.:||: ..|..||:|.:.
 Worm   517 QVSGQAGGVMKEADQISETEPTELGKKRVKPKKNDIFGVPSDVALIKYVELS-ASVEGIRQRYQT 580

  Fly   495 IAEVPFNSTNKYQVSIHE---------TEDTNDP-----RYLLVMKGAPERILERCSTIFINGKE 545
            :.|:||||..:.||.:..         :|..::|     |:::..|||||.||.:||. :..|||
 Worm   581 VFEIPFNSIRRCQVVVARYLASDFPMTSELVDNPEEGQSRFMIFTKGAPEVILGKCSN-YRQGKE 644

  Fly   546 -KVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGLMSM 609
             |.:||..:.....|:..||..|.||:.|......:|   :..||...:.|   .:|.|:|:.::
 Worm   645 LKTIDETYRTECQAAWEMLGNEGRRVIAFAQKSFNAD---DSTKFTGQEYN---GDLVFLGMAAI 703

  Fly   610 IDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPVSEVN 674
            :||||.....|:.:|:.||:||.|:|||||.||.|||:.:|:|  |:.|      .||    :|.
 Worm   704 MDPPRPETAAAIEQCKMAGVKVFMITGDHPTTATAIARQIGLI--GSST------NLN----DVE 756

  Fly   675 PREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDGVND 739
            ..:...|||.|.:|::......:.:|:.| .||||||:.:|||.||:..||.|..|||||.||:|
 Worm   757 KPQNSWAVVTGDQLKNYKKSDWNLLLKNH-NIVFARTNTEQKLEIVQEVQRRGETVAVTGGGVDD 820

  Fly   740 SPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE 804
            :|.|..|::|:|||.:|||::||.||::||||||||||.|:|||||:||||:.|:|||.....||
 Worm   821 TPVLAHANVGIAMGQSGSDIAKQTADIVLLDDNFASIVMGIEEGRLLFDNLRLSLAYTFAHLWPE 885

  Fly   805 ISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVNSRLIS 869
            :.|.:...:..:|..|..:.||.:||.::|.||||||||..|.|||..|||.. ..:|::..|:.
 Worm   886 VFPIMMSFMLGLPHGLSPLQILSVDLASEMPPAISLAYEQPENDIMHTPPRSR-TARLLSKSLLV 949

  Fly   870 MAY-----G-QIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRD 928
            .||     | .||.|.|....:.|     .|..:...||.....|...|.| .|.|.|..:..:.
 Worm   950 YAYILAGFGITIGCIAAYLSVYWY-----HNIPISDILFTAEHHWKIGAKN-FTTSQGLTFGEQQ 1008

  Fly   929 RKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFLSYCPGME 993
            :..::.....|:.|::|:.|...|..|.|||.|:|:.|:.|....|.::.|.:|.....|.|..:
 Worm  1009 QLFIKGQAAAAWQITLVMSQVFHLYNCTTRRVSVFRHGLTNIVSVFAVIIEILLLFMFVYTPVFQ 1073

  Fly   994 KGLRMY-PLKLVWWFPAIPFALAIFIYDETRRFYLRRNP 1031
            ..:.:: |...||....| ..|.:..::|.|::::|..|
 Worm  1074 YIMDIHTPPAHVWAIAPI-VGLYLLAFNEMRKYFIRNFP 1111

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 358/1106 (32%)
Cation_ATPase_N 58..132 CDD:214842 22/82 (27%)
E1-E2_ATPase 152..383 CDD:278548 84/237 (35%)
Cation_ATPase 445..539 CDD:289987 38/170 (22%)
COG4087 <695..770 CDD:226572 39/74 (53%)
Cation_ATPase_C 817..1025 CDD:279079 66/214 (31%)
catp-1NP_001122528.1 HAD_like 91..1111 CDD:389748 350/1061 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D388324at2759
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100215
Panther 1 1.100 - - O PTHR43294
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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