DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atpalpha and atp2b4

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:XP_002934276.2 Gene:atp2b4 / 100487776 XenbaseID:XB-GENE-960658 Length:1257 Species:Xenopus tropicalis


Alignment Length:1148 Identity:302/1148 - (26%)
Similarity:478/1148 - (41%) Gaps:338/1148 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LYQRFQTHPENGL--SHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLW-------- 123
            |.:|.:|.|..||  :.|..::..:..|.|.: |||:...           |..|:|        
 Frog    56 LCRRLKTSPTEGLPGTAADLEKRRQTFGQNFI-PPKKPKT-----------FLQLVWEALQDVTL 108

  Fly   124 ----IGAILCFVAYSIQASTSEEPADDNLYLG---------------------IVLSAV-VIVTG 162
                |.||:     |:..|....|..:....|                     |:||.| |::..
 Frog   109 IILEIAAII-----SLGLSFYRPPGGETEGCGGAAAGAEDEGEAEAGWIEGAAILLSVVCVVLVT 168

  Fly   163 IFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDRIPADIRIIEAR 227
            .|:.:.:.|..:.::|......:| ||:|..:.:.:...::|:||:.:||:||.:|.|...|:..
 Frog   169 AFNDWSKEKQFRGLQSRIEQEQKF-TVVRGSQVIQIPVAEMVVGDIAQVKYGDLLPTDGIFIQGN 232

  Fly   228 NFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGDHTVMGRI---- 288
            :.|:|.|||||||:...:..:   ::|     :....|:.:||:.:.:|.:.|.::..|.|    
 Frog   233 DLKIDESSLTGESDQVRKSVD---KDP-----MLLSGTHVMEGSGRMLVTAVGVNSQTGIIFTLL 289

  Fly   289 ---------------------------------------------------AGLASG-------- 294
                                                               |.|.:|        
 Frog   290 GASEAEDEKKDKKGVKKEEGPQLQVGSTHPPSHPPAATDGAAGANAIDNANASLVNGKMQDGNVE 354

  Fly   295 -------------------LDTGE--------------------------TPIAKEIHHFIHLIT 314
                               |.:.|                          |.:|.:|.....:::
 Frog   355 SIQNKAKQQDGAAAMEMQPLKSAEGGDGDDKDKKKSNPHKKEKSVLQGKLTKLAVQIGKAGLVMS 419

  Fly   315 GVAVFLGVTFFVI-AFILG-YHWLD----------AVIFLIG--IIVANVPEGLLATVTVCLTLT 365
            .:.|.:.|.:|.| .|::. ..||.          ...|:||  ::|..|||||...||:.|..:
 Frog   420 AITVIILVLYFAIDTFVVNKRQWLPECTPIYIQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYS 484

  Fly   366 AKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIIEADTTEDQSGVQYD 430
            .|:|...|.||::|:|.||:|:.:.||||||||||.|||||...:..:  :......|..|:...
 Frog   485 VKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQAFVGD--VHYKEIPDPDGLPAK 547

  Fly   431 RTSPGFKALSRIATLCNR---AEFKGGQDGVPILKKEVSGDASEAALLKCMELALGDVMNIRK-- 490
            .......|::..:...::   ||..||      |.::| |:.:|..|       ||.|:::::  
 Frog   548 TLDVLVHAIAINSAYTSKVLPAEKDGG------LPRQV-GNKTECGL-------LGFVLDLKRDY 598

  Fly   491 ---RNK----KIAEV-PFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCS-TIFINGKEK 546
               |||    |:.:| .|||..|...::.:.||.:   |.:..|||.|.:|::|| |:...|:.:
 Frog   599 QVVRNKIPEEKLYKVYTFNSVRKSMSTVVKLEDGS---YRMYSKGASEIVLKKCSRTLNEAGEPR 660

  Fly   547 VL-----DEEMKEAFNNAYMELGGLGERVLGFCDF-MLPSDKYPNGFKFNTDDINFPIDNLRFVG 605
            :.     |:.:|.....  |...||....:.:.|| |.|...:.     |.:||   :.:|..:.
 Frog   661 IFRPRDRDDMVKNVIEP--MACDGLRTICIAYRDFPMSPEPDWD-----NENDI---VTDLTCLA 715

  Fly   606 LMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPV 670
            ::.:.||.|..||:|:.||:.|||.|.|||||:..||:|||...|||..|    ||.   |.|..
 Frog   716 VVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAIKCGIIHPG----EDF---LCIEG 773

  Fly   671 SEVNPREAKAAVVHGAELRDVSSDQLDEI---LRYHTEIVFARTSPQQKLIIVEGC-------QR 725
            .|.|.|...       |..::..:::|:|   ||     |.||:||..|..:|:|.       ||
 Frog   774 KEFNRRIRN-------EKGEIEQERIDKIWPKLR-----VLARSSPTDKHTLVKGIIDSTQVEQR 826

  Fly   726 MGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNL 790
            .  :|||||||.||.|||||||:|.||||||:||:|:|:|:||.||||.|||..|..||.::|::
 Frog   827 Q--VVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNFTSIVKAVMWGRNVYDSI 889

  Fly   791 KKSIAYTLTSNIPEISPFLAF----ILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMK 851
            .|.:.:.||.|:  ::..:||    |..|.||.  .|.:|.::|..|...:::||.|.....::.
 Frog   890 SKFLQFQLTVNV--VAVIVAFTGACITQDSPLK--AVQMLWVNLIMDTFASLALATEPPTESLLL 950

  Fly   852 RPP---RDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFV------------------------ 889
            |.|   ..|...:.:...::..|..|:.:|     |.:.||                        
 Frog   951 RKPYGRNKPLISRTMMKNILGHAVYQLTLI-----FTLLFVGEDLFNIDSGRNAPLHSPPSEHYT 1010

  Fly   890 ------IMAE--NGFLPKKLFGIRKMWDSKAVNDL--TDSYGQEWTYRDRKTLEYTCHTAFFISI 944
                  :|.:  |....:|:.|.|.::|....|.:  |...|                 .|.|.|
 Frog  1011 IIFNTFVMMQLFNEINARKIHGERNVFDGIFRNPIFCTIVLG-----------------TFAIQI 1058

  Fly   945 VVVQWADLIICKTRRNSIFQQGMRNWA--LNFG-LVFETVLAA 984
            |:||:..    |....|..|.....|.  |.|| ||:..|:.:
 Frog  1059 VIVQFGG----KPFSCSPLQLDQWMWCIFLGFGELVWGQVITS 1097

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 302/1148 (26%)
Cation_ATPase_N 58..132 CDD:214842 18/76 (24%)
E1-E2_ATPase 152..383 CDD:278548 73/353 (21%)
Cation_ATPase 445..539 CDD:289987 31/107 (29%)
COG4087 <695..770 CDD:226572 44/84 (52%)
Cation_ATPase_C 817..1025 CDD:279079 43/208 (21%)
atp2b4XP_002934276.2 ATPase-IIB_Ca 12..1101 CDD:273668 302/1148 (26%)
ATP_Ca_trans_C 1140..1186 CDD:403580
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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