DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atpalpha and atp1a3

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001120366.1 Gene:atp1a3 / 100145440 XenbaseID:XB-GENE-996131 Length:1025 Species:Xenopus tropicalis


Alignment Length:1033 Identity:780/1033 - (75%)
Similarity:889/1033 - (86%) Gaps:10/1033 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 HGRADSYRVATVIATDDDNRTADGQYKSRRKMPAKVNKKENLDDLKQELDIDFHKISPEELYQRF 73
            :||:|||||||.....||.....|:         .|.||| :||||:|:.:..|||:.||:.::.
 Frog     3 YGRSDSYRVATTQDNKDDESPKKGK---------GVQKKE-IDDLKKEVAMTEHKITVEEVCRKL 57

  Fly    74 QTHPENGLSHAKAKENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQAS 138
            .|....||:.:||.|.|.||||||||||..||||:|||:.|||||::||||||||||.||.|.||
 Frog    58 NTDCVQGLTLSKAAEILARDGPNALTPPPTTPEWIKFCRQLFGGFSILLWIGAILCFFAYGILAS 122

  Fly   139 TSEEPADDNLYLGIVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDL 203
            ..|||:.|||||||||:||||:||.||||||:|||||||||||||||.|.|||||||:.|.||::
 Frog   123 MEEEPSGDNLYLGIVLAAVVIITGCFSYYQEAKSSKIMESFKNMVPQQALVIREGEKMQLNAEEV 187

  Fly   204 VLGDVVEVKFGDRIPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAV 268
            |:||:||||.|||:|||:|||.:...||||||||||||||:|..:.||||||||:|:||||||.|
 Frog   188 VVGDLVEVKGGDRVPADLRIISSHGCKVDNSSLTGESEPQTRSPDCTHENPLETRNIAFFSTNCV 252

  Fly   269 EGTAKGVVISCGDHTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGY 333
            ||||:|:|::.||.|||||||.|||||:.|:|||||||.|||||||||||||||||||::.||||
 Frog   253 EGTARGIVVATGDRTVMGRIATLASGLEVGKTPIAKEIEHFIHLITGVAVFLGVTFFVLSLILGY 317

  Fly   334 HWLDAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGT 398
            .||:|||||||||||||||||||||||||||||||||.|||||||||||||||||||||||||||
 Frog   318 TWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGT 382

  Fly   399 LTQNRMTVAHMWFDNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKK 463
            |||||||||||||||||.||||||||||..:|::||.:..|:|||.|||||.||.|.|.:|:||:
 Frog   383 LTQNRMTVAHMWFDNQIHEADTTEDQSGASFDKSSPTWLGLARIAALCNRAVFKAGNDNIPVLKR 447

  Fly   464 EVSGDASEAALLKCMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSIHETEDTNDPRYLLVMKGA 528
            :|:|||||:|||||:||:.|.|..:|:::||:||:|||||||||:|||||||.||.|||||||||
 Frog   448 DVAGDASESALLKCIELSCGSVKAMREKSKKVAEIPFNSTNKYQLSIHETEDPNDNRYLLVMKGA 512

  Fly   529 PERILERCSTIFINGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDD 593
            |||||:.||||.|.|||:.||:|:||||.|||:|||||||||||||.:..|.:.:|.||.|:|:|
 Frog   513 PERILDVCSTILIQGKEQPLDDELKEAFQNAYLELGGLGERVLGFCHYYFPEELHPKGFAFDTED 577

  Fly   594 INFPIDNLRFVGLMSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNET 658
            :||..:||.|||||||||||||||||||.|||||||||||||||||||||||||.||||||||||
 Frog   578 LNFSTENLCFVGLMSMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNET 642

  Fly   659 VEDIAQRLNIPVSEVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGC 723
            |||||.|||||||:||||:|||.|:||.:|:|:|::|:||||:.|||||||||||||||||||||
 Frog   643 VEDIAARLNIPVSQVNPRDAKACVIHGTDLKDMSTEQIDEILQNHTEIVFARTSPQQKLIIVEGC 707

  Fly   724 QRMGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 788
            ||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   708 QRQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFD 772

  Fly   789 NLKKSIAYTLTSNIPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRP 853
            |||||||||||||||||:|||.||:.:|||||||:||||||||||||||||||||.||:|||||.
 Frog   773 NLKKSIAYTLTSNIPEITPFLLFIMANIPLPLGTITILCIDLGTDMVPAISLAYEAAESDIMKRQ 837

  Fly   854 PRDPFNDKLVNSRLISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTD 918
            ||:|..|||||.|||||||||||||||..|||.||||:|||||||..|.|||..||.::||||.|
 Frog   838 PRNPRTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPSHLIGIRLTWDDRSVNDLED 902

  Fly   919 SYGQEWTYRDRKTLEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLA 983
            ||||:|||..||.:|:|||||||:|||||||||:|||||||||:|||||:|..|.|||..||.||
 Frog   903 SYGQQWTYEQRKIVEFTCHTAFFVSIVVVQWADVIICKTRRNSVFQQGMKNKILIFGLFEETALA 967

  Fly   984 AFLSYCPGMEKGLRMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041
            |||||||||:..|||||||..|||.|.|::..||:|||.|:..|||:||||:|:|:||
 Frog   968 AFLSYCPGMDIALRMYPLKPSWWFCAFPYSFLIFVYDEIRKLILRRHPGGWVEKESYY 1025

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 765/995 (77%)
Cation_ATPase_N 58..132 CDD:214842 44/73 (60%)
E1-E2_ATPase 152..383 CDD:278548 184/230 (80%)
Cation_ATPase 445..539 CDD:289987 66/93 (71%)
COG4087 <695..770 CDD:226572 70/74 (95%)
Cation_ATPase_C 817..1025 CDD:279079 157/207 (76%)
atp1a3NP_001120366.1 ATPase-IIC_X-K 30..1025 CDD:273445 765/995 (77%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 335 1.000 Domainoid score I1133
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H113729
Inparanoid 1 1.050 1570 1.000 Inparanoid score I90
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D388324at2759
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 1 1.000 - - otm48370
Panther 1 1.100 - - O PTHR43294
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X416
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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