DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atpalpha and atp1a2

DIOPT Version :9

Sequence 1:NP_732572.1 Gene:Atpalpha / 48971 FlyBaseID:FBgn0002921 Length:1041 Species:Drosophila melanogaster
Sequence 2:NP_001096439.1 Gene:atp1a2 / 100125050 XenbaseID:XB-GENE-6034696 Length:1020 Species:Xenopus tropicalis


Alignment Length:1020 Identity:763/1020 - (74%)
Similarity:879/1020 - (86%) Gaps:11/1020 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 GQYKSRRKMPAKVN----------KKENLDDLKQELDIDFHKISPEELYQRFQTHPENGLSHAKA 86
            |:.:.|...||..|          |::.:|:||:|:.:|.||:|.||:.:::.|....||::|:|
 Frog     2 GRGEGREYSPAATNADNGGGKKKQKEKEMDELKKEVAMDDHKLSMEEIGRKYGTDLAKGLTNARA 66

  Fly    87 KENLERDGPNALTPPKQTPEWVKFCKNLFGGFAMLLWIGAILCFVAYSIQASTSEEPADDNLYLG 151
            .|.|.:|||||||||..||||||||:.|||||::||||||||||:||.||.:..:||.:||||||
 Frog    67 AEVLAQDGPNALTPPPTTPEWVKFCRQLFGGFSILLWIGAILCFLAYGIQIAMEDEPINDNLYLG 131

  Fly   152 IVLSAVVIVTGIFSYYQESKSSKIMESFKNMVPQFATVIREGEKLTLRAEDLVLGDVVEVKFGDR 216
            :||:|||||||.||||||:||||||:||||||||.|.||||||||.:.||.:|:||:||:|.|||
 Frog   132 VVLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREGEKLQINAEMVVVGDLVEIKGGDR 196

  Fly   217 IPADIRIIEARNFKVDNSSLTGESEPQSRGAEFTHENPLETKNLAFFSTNAVEGTAKGVVISCGD 281
            :|||||||.|...||||||||||||||:|..||||||||||:|:.|||||.||||.:|:||:.||
 Frog   197 VPADIRIIIAHGCKVDNSSLTGESEPQTRSPEFTHENPLETRNICFFSTNCVEGTGRGIVINTGD 261

  Fly   282 HTVMGRIAGLASGLDTGETPIAKEIHHFIHLITGVAVFLGVTFFVIAFILGYHWLDAVIFLIGII 346
            .|||||||.|||||:.|.||||.||.||||:||||||||||:|||::.||||.||:|||||||||
 Frog   262 RTVMGRIATLASGLEVGRTPIAMEIEHFIHIITGVAVFLGVSFFVLSLILGYSWLEAVIFLIGII 326

  Fly   347 VANVPEGLLATVTVCLTLTAKRMASKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF 411
            ||||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||
 Frog   327 VANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWF 391

  Fly   412 DNQIIEADTTEDQSGVQYDRTSPGFKALSRIATLCNRAEFKGGQDGVPILKKEVSGDASEAALLK 476
            ||||.||||||||||..:|:.||.:.||||||.|||||.||.||:.|.:.|::.:|||||:||||
 Frog   392 DNQIHEADTTEDQSGTTFDKRSPTWTALSRIAGLCNRAVFKVGQEKVAVSKRDTAGDASESALLK 456

  Fly   477 CMELALGDVMNIRKRNKKIAEVPFNSTNKYQVSIHETEDTNDPRYLLVMKGAPERILERCSTIFI 541
            |:||:.|.|..:|.||.|:||:|||||||:|:||||.||:.: .:||||||||||||:|||||.:
 Frog   457 CIELSCGSVRKLRDRNPKVAEIPFNSTNKFQLSIHEREDSPE-GHLLVMKGAPERILDRCSTIML 520

  Fly   542 NGKEKVLDEEMKEAFNNAYMELGGLGERVLGFCDFMLPSDKYPNGFKFNTDDINFPIDNLRFVGL 606
            :|.|:.||||||:||.|||.|||||||||||||...:|:||:..||||:||:.|||:.:|.|:||
 Frog   521 HGAEQPLDEEMKDAFQNAYFELGGLGERVLGFCHLYIPADKFQRGFKFDTDEPNFPLTDLCFIGL 585

  Fly   607 MSMIDPPRAAVPDAVAKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGNETVEDIAQRLNIPVS 671
            :||||||||||||||.|||||||||||||||||||||||||.|||||||||||||||.||||||:
 Frog   586 ISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNETVEDIADRLNIPVN 650

  Fly   672 EVNPREAKAAVVHGAELRDVSSDQLDEILRYHTEIVFARTSPQQKLIIVEGCQRMGAIVAVTGDG 736
            :||||||||.||||::|:|::|:|||::|:.|||||||||||||||||||||||.||||||||||
 Frog   651 QVNPREAKACVVHGSDLKDMTSEQLDDLLKNHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDG 715

  Fly   737 VNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 801
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   716 VNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSN 780

  Fly   802 IPEISPFLAFILCDIPLPLGTVTILCIDLGTDMVPAISLAYEHAEADIMKRPPRDPFNDKLVNSR 866
            ||||:|||.||:.:||||||||||||||||||||||||||||.||:|||||.||:|..|||||.|
 Frog   781 IPEITPFLLFIIANIPLPLGTVTILCIDLGTDMVPAISLAYEAAESDIMKRQPRNPRTDKLVNER 845

  Fly   867 LISMAYGQIGMIQAAAGFFVYFVIMAENGFLPKKLFGIRKMWDSKAVNDLTDSYGQEWTYRDRKT 931
            ||||||||||||||..|||.||||:|||||||.:|.|||..||.::.||:.|||||||||..||.
 Frog   846 LISMAYGQIGMIQALGGFFTYFVILAENGFLPSRLLGIRLDWDDRSNNDVEDSYGQEWTYEQRKV 910

  Fly   932 LEYTCHTAFFISIVVVQWADLIICKTRRNSIFQQGMRNWALNFGLVFETVLAAFLSYCPGMEKGL 996
            :|:|||||||.|||||||||||||||||||:|||||:|..|.|||:.||.|||||||||||:..|
 Frog   911 VEFTCHTAFFASIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLLEETALAAFLSYCPGMDVAL 975

  Fly   997 RMYPLKLVWWFPAIPFALAIFIYDETRRFYLRRNPGGWLEQETYY 1041
            ||||||:.|||.|.|::|.||:|||.|:..|||:||||:|:|:||
 Frog   976 RMYPLKVTWWFCAFPYSLLIFLYDEVRKLILRRDPGGWVEKESYY 1020

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AtpalphaNP_732572.1 ATPase-IIC_X-K 45..1041 CDD:273445 757/1005 (75%)
Cation_ATPase_N 58..132 CDD:214842 45/73 (62%)
E1-E2_ATPase 152..383 CDD:278548 182/230 (79%)
Cation_ATPase 445..539 CDD:289987 60/93 (65%)
COG4087 <695..770 CDD:226572 69/74 (93%)
Cation_ATPase_C 817..1025 CDD:279079 159/207 (77%)
atp1a2NP_001096439.1 ATPase-IIC_X-K 30..1020 CDD:273445 755/990 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 460 1.000 Domainoid score I478
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 1570 1.000 Inparanoid score I90
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D388324at2759
OrthoFinder 1 1.000 - - FOG0000283
OrthoInspector 1 1.000 - - otm48370
Panther 1 1.100 - - LDO PTHR43294
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X416
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.160

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