DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)73Ah and DRIP1

DIOPT Version :9

Sequence 1:NP_001246797.1 Gene:l(3)73Ah / 48903 FlyBaseID:FBgn0002283 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_172162.3 Gene:DRIP1 / 837188 AraportID:AT1G06770 Length:421 Species:Arabidopsis thaliana


Alignment Length:79 Identity:32/79 - (40%)
Similarity:50/79 - (63%) Gaps:3/79 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHL--EEKKTCPTCDNIIHQSHPLQY 66
            :||.:|:...::|.||.....||||::|||||||:.|:.:.:  :|.:|||.| ||...|.||:.
plant     4 KVKKETMRACLSCSICDNILRDATTISECLHTFCRKCIYEKITEDEIETCPVC-NIDLGSTPLEK 67

  Fly    67 ISFDRTMQDIVYKL 80
            :..|..:||:..|:
plant    68 LRPDHNLQDLRAKI 81

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)73AhNP_001246797.1 RING-HC_PCGF3 13..59 CDD:319649 22/47 (47%)
RAWUL_PCGF3 133..217 CDD:340603
DRIP1NP_172162.3 RING_Ubox 14..57 CDD:418438 20/43 (47%)
RAWUL_DRIP_like 310..413 CDD:340607
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 52 1.000 Domainoid score I4257
eggNOG 1 0.900 - - E1_KOG2660
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000290
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X607
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.810

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