DRSC/TRiP Functional Genomics Resources

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Protein Alignment l(3)73Ah and pcgf5b

DIOPT Version :10

Sequence 1:NP_524933.1 Gene:l(3)73Ah / 48903 FlyBaseID:FBgn0002283 Length:222 Species:Drosophila melanogaster
Sequence 2:NP_001038700.1 Gene:pcgf5b / 692252 ZFINID:ZDB-GENE-060512-34 Length:232 Species:Danio rerio


Alignment Length:234 Identity:92/234 - (39%)
Similarity:150/234 - (64%) Gaps:23/234 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RRVKLKTINPHITCKICGGYFIDATTVTECLHTFCKSCLVKHLEEKKTCPTCDNIIHQSHPLQYI 67
            |:..::..|..|||.:|.||.|..||||||||||||||:|:|.|:...||.|...:|:::||:.:
Zfish     5 RKHLVRDFNHFITCFVCKGYLIKPTTVTECLHTFCKSCIVQHFEDSNDCPKCGIQVHETNPLEML 69

  Fly    68 SFDRTMQDIVYKLVPKLQEDESRRERDFYKSR-----NMPCPKDITQNHEDDNEKVMDAHAESDF 127
            ..|.|::::::||||.|:|.|.::|.:|::.:     |.|..|....:.|||::      .:.|:
Zfish    70 RLDNTLEEVIFKLVPGLREKEQQQEDEFWRRKESNDENGPMCKKRRVDEEDDDK------GDGDY 128

  Fly   128 HRLDEQVNVCLECI-------SNNFKNLQRRFIRCSSQATITHLKKLVAKKILNGIEKYREIDIL 185
            ||.|.|:.:||:|:       .|..|.|.::|||||::.|:..:||.::.|:  .:....|:|:|
Zfish   129 HRSDPQIAICLDCLRINGQMGENIVKGLMKKFIRCSTRVTVGTIKKFLSLKL--KLPSSYELDVL 191

  Fly   186 CNEELLGKDHTLKFVYVTRWRFRDP---PLRLQFRPRVE 221
            ||.|::|||||::|:|:||||.|..   |:.|::|||::
Zfish   192 CNGEIMGKDHTMEFIYMTRWRLRGENVYPMVLEYRPRID 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
l(3)73AhNP_524933.1 RING_Ubox 4..96 CDD:473075 41/91 (45%)
RAWUL_PCGF3 133..217 CDD:340603 36/93 (39%)
pcgf5bNP_001038700.1 RING-HC_PCGF5 6..100 CDD:438395 42/93 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..128 8/40 (20%)
RAWUL_PCGF5 132..232 CDD:340604 40/101 (40%)

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